PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022152944.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family HD-ZIP
Protein Properties Length: 847aa    MW: 92565.2 Da    PI: 6.004
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022152944.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.52.2e-182583357
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    k  ++t+eq+e+Le++++++++ps  +r++L + +    +++ +q+kvWFqNrR +ek+
  XP_022152944.1 25 KYVRYTAEQVEALERVYAECPKPSSLRRQQLVRDCpilaNIEPKQIKVWFQNRRCREKQ 83
                    56789****************************************************97 PP
2START159.62.4e-501673752205
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee ++++++ka+ ++  Wv+++ +++g++++ +f+ s+++sg a+ra+g+v  +++    e+l+d++ W +++++ e+  +  +g  g+++l 
  XP_022152944.1 167 FAEEILAAFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPM-KITEILKDRPSWFRDCRSLEVFTTFPTGngGTIELV 260
                     5789999***************************************************.5555566666*****************999****** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                     +++ +a+++l+p Rdf+++Ry+r+l+ g +v++++S++     p+    +++vRae+lpSg+li+p+++g+s +++v+h +l+ +++++++r+l+
  XP_022152944.1 261 YTQVYAPTTLAPaRDFWTLRYTRTLENGNLVVCERSLSGSGTGPNaasAAQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLEPWSVPEVVRPLY 355
                     **************************************988888889999********************************************* PP

                     HHHHHHHHHHHHHHTXXXXX CS
           START 186 ksglaegaktwvatlqrqce 205
                     +s+   ++k++ a+l++ ++
  XP_022152944.1 356 ESSKGVAQKMTIAALRYVRQ 375
                     ***************98765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 847 aa     Download sequence    
MAMAMAHHRE GGDGGINGHL DSSGKYVRYT AEQVEALERV YAECPKPSSL RRQQLVRDCP  60
ILANIEPKQI KVWFQNRRCR EKQRKEASRL QSLNSKLTAM NKLLMEENDR LQKQVSQLVS  120
ENGCMRQHLQ TANAPAATTT DASCDSVAAT PQHSLRDASN PAGLLSFAEE ILAAFLSKAT  180
GTAVDWVQMP GMKPGPDSVG IFAISQSCSG VAARACGLVS LEPMKITEIL KDRPSWFRDC  240
RSLEVFTTFP TGNGGTIELV YTQVYAPTTL APARDFWTLR YTRTLENGNL VVCERSLSGS  300
GTGPNAASAA QFVRAEMLPS GYLIRPCEGG GSIIHIVDHL NLEPWSVPEV VRPLYESSKG  360
VAQKMTIAAL RYVRQIAQET SGEVVYSLGR QPAVLRTFSQ RLSRGFNDAV NGFNDDGWSL  420
INCDGAEDVT LAINSSKNLN TSYDPVNSLA FHGGILCAKA SMLLQNVPPI ALIRFLREHR  480
SEWADFNADA YSAASLKTGS YAYPGMRPTR FTGSQIIMPL GHTIEQEELL EVVRLESHPL  540
AQEDAFMSGD IHLLQMCTGI DENAVGACSE LVFAPIDEMF PDDAVLLPSG FRIIPLHSKT  600
GDPKDAWNSN RTLDLTSSLE LGSYAPQDSA AASTSHNFRS VLTIAFQFPF GSNLQDDVAA  660
MARQYVRSVV SAVQRVAVAI SPSGLSLPRE PKLSSACPEA LTLAQWICHS YRCHTGTELV  720
PSEGVDNDSV LKNLWTHQDA FLCCSLKSLP PVFMFANQAG LDMLETTLVA LQDITLDKIL  780
GDSARRAFSA DFSNLMHQGF AYIPAGICMS TMGRHASFEQ AIAWKVLAED ESTVHCLALS  840
FVNWSFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60690.10.0HD-ZIP family protein