PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022152324.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 228aa MW: 25259.1 Da PI: 10.2962 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 60.3 | 3e-19 | 69 | 123 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++k+q + Lee F+ n++++ +++e LA++l+L+ rqV vWFqNrRa+ k XP_022152324.1 69 RKKLRLSKDQSRLLEESFRLNHTLNPKQKEALAMELKLKPRQVEVWFQNRRARSK 123 788899***********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 115.2 | 4e-37 | 69 | 158 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rlsk+q++lLEesF+ +++L+p++K++la eL+l+prqv+vWFqnrRAR k+kq+E+++e+Lkr++ +l+++n+rL+ e eeLr ++ XP_022152324.1 69 RKKLRLSKDQSRLLEESFRLNHTLNPKQKEALAMELKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGTLTDQNRRLRLELEELR-AI 158 69*************************************************************************************9.44 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence |
MAVSPINSSS LELSISMPGF ASSPARPSFA RELDMNRVPA GAVAEEEWAV ALSTEEEEEE 60 SSANGGRPRK KLRLSKDQSR LLEESFRLNH TLNPKQKEAL AMELKLKPRQ VEVWFQNRRA 120 RSKLKQTEME CEYLKRWFGT LTDQNRRLRL ELEELRAIKV APPALISAPT RQPTLPASTV 180 TMCPHCERVT AASIISGKAA APATAVTATM PSKALLTAHK LRRPSAAC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 67 | 73 | RPRKKLR |
2 | 118 | 126 | RRARSKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01430.1 | 2e-58 | HD-ZIP family protein |