PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022152277.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family ARR-B
Protein Properties Length: 605aa    MW: 68627.7 Da    PI: 6.7004
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022152277.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like41.23.6e-13246293453
         G2-like   4 lrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkY 53 
                     l W+ e H++F  a+++LG  ++  Pk il++m+ ++Ltl +v+ HLQ +
  XP_022152277.1 246 LLWNAERHRKFTYALNKLG--DRSRPKLILKMMNEPCLTLRQVANHLQVF 293
                     67****************5..7899***********************87 PP
2Response_reg402.1e-14181231107
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 
                     +l+vd +pl ++ ++++le++ y +v+++++++ al +++ek   +Dl++   +mp+md + +l  + +++  + +i++ +  + + a++    G
  XP_022152277.1  18 ILVVDHDPLSLMQMASLLEQQFY-KVTTTQQASVALSMIEEKGdrFDLVMANASMPDMDKFSFLHALLKKN--IAVIFMLSGMNLDVATKPSAGG 109
                     89*****************9999.***************888888**********************8766..999999999999********** PP

                     ESEEEESS--HHHH CS
    Response_reg  94 akdflsKpfdpeel 107
                      + fl +p+++++l
  XP_022152277.1 110 KSYFLQNPISKDDL 123
                     **********9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 605 aa     Download sequence    
MGYWVTDYLP RLDKNLNILV VDHDPLSLMQ MASLLEQQFY KVTTTQQASV ALSMIEEKGD  60
RFDLVMANAS MPDMDKFSFL HALLKKNIAV IFMLSGMNLD VATKPSAGGK SYFLQNPISK  120
DDLKYVWQHI YHRNINVTKL AQKVNFIEKS KSGGIKIADT IDLSGSDANN NSYINYQPTN  180
YKGKERTKQT EYQDGLVGSN FGGRRSSHDI EGTIKEKRIK FGSQRIDKDH ERRNEYYIPS  240
DGRSCLLWNA ERHRKFTYAL NKLGDRSRPK LILKMMNEPC LTLRQVANHL QVFFYQKHKA  300
QVECIKRRRE NKLAFKGETS KSNSSARTQL SPLLQKQHHK MRRIRDGSAR STCFLGGDKL  360
RPIVPKTQPI PGLPVSNFAN CGLGMLNHNF QQVDSYLNYN SIPFNNNKEV GLYPYNIQTF  420
EKEAGNVLCS DVSEKFALVG EEVQISELNF PNVSTMASEV ACSRIFDEIQ LPDNLLDVVD  480
HQLYLSASEI ENQKAMECSG ISKEIPSPFR EITVPDSNNV APDFIDWEPE LPTTFGNEGS  540
QPLTEYADMI LNVLEDDPYN LGSDLSLSDV DKYCEWLRST VLEDGSSPNN FICDNAEKVP  600
IGNAQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68210.18e-34ARR-B family protein