PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022152276.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family ARR-B
Protein Properties Length: 606aa    MW: 68666.8 Da    PI: 6.7004
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022152276.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like41.23.6e-13247294453
         G2-like   4 lrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkY 53 
                     l W+ e H++F  a+++LG  ++  Pk il++m+ ++Ltl +v+ HLQ +
  XP_022152276.1 247 LLWNAERHRKFTYALNKLG--DRSRPKLILKMMNEPCLTLRQVANHLQVF 294
                     67****************5..7899***********************87 PP

2Response_reg39.23.6e-14181241107
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 
                     +l+vd +pl ++ ++++le++ y +v+++++++ al +++ek   +Dl++   +mp+md + +l  + +++  +  +++++ +  + a++    G
  XP_022152276.1  18 ILVVDHDPLSLMQMASLLEQQFY-KVTTTQQASVALSMIEEKGdrFDLVMANASMPDMDKFSFLHALLKKNIAVISVMLSGMN-LDVATKPSAGG 110
                     89*****************9999.***************888888**********************7766455555555333.67999999999 PP

                     ESEEEESS--HHHH CS
    Response_reg  94 akdflsKpfdpeel 107
                      + fl +p+++++l
  XP_022152276.1 111 KSYFLQNPISKDDL 124
                     999******99998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 606 aa     Download sequence    
MGYWVTDYLP RLDKNLNILV VDHDPLSLMQ MASLLEQQFY KVTTTQQASV ALSMIEEKGD  60
RFDLVMANAS MPDMDKFSFL HALLKKNIAV ISVMLSGMNL DVATKPSAGG KSYFLQNPIS  120
KDDLKYVWQH IYHRNINVTK LAQKVNFIEK SKSGGIKIAD TIDLSGSDAN NNSYINYQPT  180
NYKGKERTKQ TEYQDGLVGS NFGGRRSSHD IEGTIKEKRI KFGSQRIDKD HERRNEYYIP  240
SDGRSCLLWN AERHRKFTYA LNKLGDRSRP KLILKMMNEP CLTLRQVANH LQVFFYQKHK  300
AQVECIKRRR ENKLAFKGET SKSNSSARTQ LSPLLQKQHH KMRRIRDGSA RSTCFLGGDK  360
LRPIVPKTQP IPGLPVSNFA NCGLGMLNHN FQQVDSYLNY NSIPFNNNKE VGLYPYNIQT  420
FEKEAGNVLC SDVSEKFALV GEEVQISELN FPNVSTMASE VACSRIFDEI QLPDNLLDVV  480
DHQLYLSASE IENQKAMECS GISKEIPSPF REITVPDSNN VAPDFIDWEP ELPTTFGNEG  540
SQPLTEYADM ILNVLEDDPY NLGSDLSLSD VDKYCEWLRS TVLEDGSSPN NFICDNAEKV  600
PIGNAQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68210.12e-33ARR-B family protein