PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022152256.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

C2H2

Protein Properties

Length: 280aa MW: 30895.2 Da PI: 8.4591

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022152256.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.6	0.00042	214	236	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp C+ Fs+ s+L H + H XP_022152256.1 214 QCPQCSAKFSSVSSLIEHVEKvH 236 7*****************99888 PP
2	zf-C2H2	14.8	8.2e-05	253	274	3	23
ETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 3 CpdCgksFsrksnLkrHirt.H 23 Cp+C++ F ++ L+ Hi + H XP_022152256.1 253 CPKCSRGFIDPVALVEHIERdH 274 ******************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 280 aa Download sequence
MGTPEFPNLG KHCYVEDCKQ IDFLPFTCDC CHQVFCLEHR SYNTHSCPKA DKRDVTVVIC 60 PLCAKGVRLI PDQDPNITWE SHVNTECDPS NYDKVTKKKK CPVPGCRELL TFSNTIKCRD 120 CLVDHCLKHR FGRDHKCPGP KKPEPAGFRF IGLLGSRKEE KGPNKPLPTS SSRWATTIRN 180 AASSMTKLSN DISQAWKTSG GSSSSGTGNG QVEQCPQCSA KFSSVSSLIE HVEKVHERGG 240 NRPGVKKVVI DACPKCSRGF IDPVALVEHI ERDHGGTSRA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41835.1	1e-119	C2H2 family protein