PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022152226.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 387aa MW: 42505.3 Da PI: 5.2642

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022152226.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	24.1	6.4e-08	290	330	9	54
HHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 r+RR+ri +++ L++l+P + K++ a++L +A +Y+k L XP_022152226.1 290 ARQRRERISERIRVLQRLVPGgN------KMDTASMLDEAANYLKFL 330 69****************955......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 387 aa Download sequence
MDDLNWDGYG SRVAMNTTSS PWFWSNYQPG LGEKFVSSNS NSNFCNSVQE LPMIKEAEDP 60 LFSKTGEALP MVMSHPLTNF TTTREVGVID LEPHIPTGVS AAAPATCSLD SLDCLLSATT 120 NSNTDTSVED DGISMILTDY TNLWNFGGNA NAVCSSRESG KNGSNSSKRS HDQTQFKAGD 180 YSVFSNDIII QSDSTSDSGG FKIISDQNLA KQKKPRSEKP PTSSNINFQQ TCSSGSSCIE 240 QEPDPEAIAQ MKEMIYRAAA FRPVNLGVEV VEKPKRKNVR ISTDPQTVAA RQRRERISER 300 IRVLQRLVPG GNKMDTASML DEAANYLKFL KSQIKALENL GQKLESLNCP PTSIAFSFNP 360 SFPIQTTSSH DSFSLQNPNH INQFPQN

Sequence ? help Back to Top

Protein Sequence Length: 387 aa Download sequence

MDDLNWDGYG SRVAMNTTSS PWFWSNYQPG LGEKFVSSNS NSNFCNSVQE LPMIKEAEDP  60
LFSKTGEALP MVMSHPLTNF TTTREVGVID LEPHIPTGVS AAAPATCSLD SLDCLLSATT  120
NSNTDTSVED DGISMILTDY TNLWNFGGNA NAVCSSRESG KNGSNSSKRS HDQTQFKAGD  180
YSVFSNDIII QSDSTSDSGG FKIISDQNLA KQKKPRSEKP PTSSNINFQQ TCSSGSSCIE  240
QEPDPEAIAQ MKEMIYRAAA FRPVNLGVEV VEKPKRKNVR ISTDPQTVAA RQRRERISER  300
IRVLQRLVPG GNKMDTASML DEAANYLKFL KSQIKALENL GQKLESLNCP PTSIAFSFNP  360
SFPIQTTSSH DSFSLQNPNH INQFPQN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	291	296	RQRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21330.1	3e-63	bHLH family protein