PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022151977.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

C2H2

Protein Properties

Length: 426aa MW: 48558.2 Da PI: 6.5471

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022151977.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.1	0.00059	137	159	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 C+ Cgk+F + L++H H XP_022151977.1 137 CSyeGCGKTFIDAGALRKHSHIH 159 77779**************7766 PP
2	zf-C2H2	16.2	2.9e-05	164	188	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C+ Cgk F ++s LkrH H XP_022151977.1 164 YVCHyeGCGKKFLDSSKLKRHFLIH 188 9********************8877 PP
3	zf-C2H2	21.5	6.3e-07	194	218	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++Cp Cgk Fs nL++H++tH XP_022151977.1 194 FVCPheGCGKAFSLDFNLRSHMKTH 218 89**********************9 PP
4	zf-C2H2	18.5	5.4e-06	224	248	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + Cp dCgk+F + + Lk+Hi +H XP_022151977.1 224 HICPypDCGKRFAHEYKLKNHITSH 248 679999*****************96 PP
5	zf-C2H2	12.4	0.00049	287	312	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y Cp C k + + + Lk H+r+ H XP_022151977.1 287 YGCPyeGCEKAYIHEYKLKLHLRReH 312 679999*****************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 426 aa Download sequence
MSTEPESFRV SPLPHPVPSP SLPFCLSSIS IEFSLSSFLS IGLSFSISTI AWRREDRDME 60 THFNHNLFDR RPILKNKTPA VKWIKEWVPQ DVVATGGKCF LLKWVTEDTL KALKEKAKQS 120 EAPEPEPEPT TEVLFLCSYE GCGKTFIDAG ALRKHSHIHG ERQYVCHYEG CGKKFLDSSK 180 LKRHFLIHTG ERDFVCPHEG CGKAFSLDFN LRSHMKTHSQ ENYHICPYPD CGKRFAHEYK 240 LKNHITSHHE KNVPAEVVKY TPPSEKQIKV SKPSGGAYAS ASSDRPYGCP YEGCEKAYIH 300 EYKLKLHLRR EHPGHLVEDN GNAPNNGENE IDASDQDGYG GKRVNKNQKQ NKPKPNLKLP 360 PSKISQRKGT TPSPAPISAV KKSWPVKEET YEEEDSEETE EDRDNVDEGW RYAENEDDDE 420 ETEYED

Sequence ? help Back to Top

Protein Sequence Length: 426 aa Download sequence

MSTEPESFRV SPLPHPVPSP SLPFCLSSIS IEFSLSSFLS IGLSFSISTI AWRREDRDME  60
THFNHNLFDR RPILKNKTPA VKWIKEWVPQ DVVATGGKCF LLKWVTEDTL KALKEKAKQS  120
EAPEPEPEPT TEVLFLCSYE GCGKTFIDAG ALRKHSHIHG ERQYVCHYEG CGKKFLDSSK  180
LKRHFLIHTG ERDFVCPHEG CGKAFSLDFN LRSHMKTHSQ ENYHICPYPD CGKRFAHEYK  240
LKNHITSHHE KNVPAEVVKY TPPSEKQIKV SKPSGGAYAS ASSDRPYGCP YEGCEKAYIH  300
EYKLKLHLRR EHPGHLVEDN GNAPNNGENE IDASDQDGYG GKRVNKNQKQ NKPKPNLKLP  360
PSKISQRKGT TPSPAPISAV KKSWPVKEET YEEEDSEETE EDRDNVDEGW RYAENEDDDE  420
ETEYED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G06634.1	1e-143	C2H2 family protein