PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022151661.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family NF-YA
Protein Properties Length: 276aa    MW: 30412.8 Da    PI: 9.285
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022151661.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA1025.6e-32172229158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep+YVNaKQy++Il+RRq+Rak+e e++++  ++kpylheSRh hA+rR+Rg+gGrF
  XP_022151661.1 172 EEPVYVNAKQYHGILRRRQSRAKAEVENRINRSQKKPYLHESRHLHAMRRERGCGGRF 229
                     69*******************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MMSSGTEYRN RPICDNLQTR NRSPNYTTDN SQSWWWHGGG HGGATTTTTT TMSKEDESNW  60
AWPKGLVSSG PGPKTSIKQM QTTISPPQGG ESAATPNKSR DASIMLPLMN NEHLASTSHS  120
ELVTLPMTAT SYQYHDACNG GITMPPFGFQ TLNSEYSKVA HGRMALPLAI AEEPVYVNAK  180
QYHGILRRRQ SRAKAEVENR INRSQKKPYL HESRHLHAMR RERGCGGRFV SKKKKVESSA  240
SMDDDENGSN ISLGSEPMSN GSSCYEGSGL HLSAYI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20910.12e-30NF-YA family protein