PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022151660.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family NF-YA
Protein Properties Length: 283aa    MW: 31215.8 Da    PI: 9.0734
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022151660.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA101.95.9e-32179236158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep+YVNaKQy++Il+RRq+Rak+e e++++  ++kpylheSRh hA+rR+Rg+gGrF
  XP_022151660.1 179 EEPVYVNAKQYHGILRRRQSRAKAEVENRINRSQKKPYLHESRHLHAMRRERGCGGRF 236
                     69*******************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MSELTLQMMS SGTEYRNRPI CDNLQTRNRS PNYTTDNSQS WWWHGGGHGG ATTTTTTTMS  60
KEDESNWAWP KGLVSSGPGP KTSIKQMQTT ISPPQGGESA ATPNKSRDAS IMLPLMNNEH  120
LASTSHSELV TLPMTATSYQ YHDACNGGIT MPPFGFQTLN SEYSKVAHGR MALPLAIAEE  180
PVYVNAKQYH GILRRRQSRA KAEVENRINR SQKKPYLHES RHLHAMRRER GCGGRFVSKK  240
KKVESSASMD DDENGSNISL GSEPMSNGSS CYEGSGLHLS AYI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20910.12e-30NF-YA family protein