PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022151556.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | Trihelix | ||||||||
Protein Properties | Length: 283aa MW: 34344.7 Da PI: 8.4604 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 70.7 | 2.7e-22 | 39 | 120 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W+ +e+++L+ +r e+++++++ k + lW +v+ +m++rgf+rs +qCk+kw+nl +ryk +++++ k + + +++p++++l+ XP_022151556.1 39 WSVEETKELLWIRAELDRSFSEIKHNRLLWISVAGRMKARGFNRSDEQCKCKWKNLVTRYKGCETMDPKA-P-K-QQFPFYNDLH 120 ********************************************************************95.3.3.369*****98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 283 aa Download sequence |
MEDNYDYDHD RDHRLLPPLR RLQRIGGNAE AAEGRFPPWS VEETKELLWI RAELDRSFSE 60 IKHNRLLWIS VAGRMKARGF NRSDEQCKCK WKNLVTRYKG CETMDPKAPK QQFPFYNDLH 120 AIFAARMQRN WWIEAEDQSR GSKRKATEQF SSEDPNDDGG EEGKDDEDKA FTSTRTTKRT 180 IKNGEKWRRA KDEESSNLKE ILKIFVKREM EMERQWREAF RVRDEERRLK EMEWRMNMEA 240 LERERMMMEM IWREKEDERR EREEARAQNR DALISALFNR LVR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G01380.1 | 2e-49 | Trihelix family protein |