PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022151376.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family NF-YA
Protein Properties Length: 328aa    MW: 35921.7 Da    PI: 9.475
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022151376.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA98.28.4e-31161217158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     d p+YVNaKQy++I++RRq Rak+  e++l +++rkpy+heSRh hA+rRpRgsgGrF
  XP_022151376.1 161 DGPIYVNAKQYHGIIRRRQIRAKAMMENRL-ARTRKPYMHESRHLHAMRRPRGSGGRF 217
                     57****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MAPQTGYLKE HEGIVPNSLG QLSSSPARLW SAFGQGSQTI FGDFGQLKAS SIEQLGSNGK  60
EFTGAKQAAQ VSEHGLEKVN TAPFSIYPGD CKNSVDAQKP SPVFSLQSPL SEYHTRFELG  120
FGQPVICANY PYMEQHYGIL SAYGPQIPGR VMLPMSLTTD DGPIYVNAKQ YHGIIRRRQI  180
RAKAMMENRL ARTRKPYMHE SRHLHAMRRP RGSGGRFLNT KNLKDGKISL ESKKVDNVNL  240
SESTGSQCSV VLQSESGTLN SPNEAKGRGF NLSSSEVPSM FSRGLQRFQI SHLRPSMQSL  300
AEIIDGGGHG MVLPKWVAAA DNCCDLCV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06510.24e-61NF-YA family protein