PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022151253.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family M-type_MADS
Protein Properties Length: 341aa    MW: 38714.6 Da    PI: 7.1181
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022151253.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF66.52.6e-21953145
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                    kr en+  rq t++kR+ngi+KKA ELS+LCd+++ +++fs+tgk
  XP_022151253.1  9 KRLENTNGRQATYAKRKNGIMKKATELSILCDIDIILLMFSPTGK 53
                    689****************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MGRVKLKIKR LENTNGRQAT YAKRKNGIMK KATELSILCD IDIILLMFSP TGKPALSSGK  60
RSIEEVIAKF AQQTPQERAK RKLESLEALR KTFKKLDHDV NIQDFLGASQ TIEDLAGQVK  120
LLRTQLSDVH QRLSYWANPD KINNVDHLTQ LEDSLRESLN QIRAHKENQQ KHPPVPLEFT  180
NQMQDGLHLP FNMSVEQQLQ QLQHFSWIPS DSQNMVLHDD PNFVPHRDVE CSASSSFASY  240
PGYFGTGRSP EISNSGQENA VLPELSRTEP LRPQLGGQNS YMSYNVNFFN DPRFQPAAEM  300
NLPVNPVDYH VNGNYDPTQH NYWASSSGPC AVSLLDDRLY P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03060.21e-106M-type_MADS family protein