PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022151252.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family M-type_MADS
Protein Properties Length: 342aa    MW: 38801.6 Da    PI: 7.1181
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022151252.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF66.52.6e-21953145
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                    kr en+  rq t++kR+ngi+KKA ELS+LCd+++ +++fs+tgk
  XP_022151252.1  9 KRLENTNGRQATYAKRKNGIMKKATELSILCDIDIILLMFSPTGK 53
                    689****************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    
MGRVKLKIKR LENTNGRQAT YAKRKNGIMK KATELSILCD IDIILLMFSP TGKPALSSGK  60
RSIEEVIAKF AQQTPQERAK RKLESLEALR KTFKKLDHDV NIQDFLGASS QTIEDLAGQV  120
KLLRTQLSDV HQRLSYWANP DKINNVDHLT QLEDSLRESL NQIRAHKENQ QKHPPVPLEF  180
TNQMQDGLHL PFNMSVEQQL QQLQHFSWIP SDSQNMVLHD DPNFVPHRDV ECSASSSFAS  240
YPGYFGTGRS PEISNSGQEN AVLPELSRTE PLRPQLGGQN SYMSYNVNFF NDPRFQPAAE  300
MNLPVNPVDY HVNGNYDPTQ HNYWASSSGP CAVSLLDDRL YP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03060.21e-108M-type_MADS family protein