PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022151206.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 378aa MW: 41720.2 Da PI: 7.5389

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022151206.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.9	3.6e-16	108	153	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l ++v+++G+ +W++Ia+++ gR++k+c++rw++ XP_022151206.1 108 RGHWRPAEDTKLRELVALYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 153 899***************************.*********996 PP
2	Myb_DNA-binding	51.8	1.8e-16	160	203	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++ +eE+++l +a++ +G++ W+ Iar ++ gRt++ +k++w+ XP_022151206.1 160 RRAFNEEEEDRLMQAHRIYGNK-WAMIARLFP-GRTDNAVKNHWHV 203 66899***************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MEAFDLDLNC AVVSSGVCDS QEESYASGRS CEVENGGGGF WKFPFSCESM TRSSETDVAD 60 GNYATSDFSD GFVVENNINE SSLNHIPHPN PSSCSNAASG AQSRLCARGH WRPAEDTKLR 120 ELVALYGPQN WNLIAEKLEG RSGKSCRLRW FNQLDPRINR RAFNEEEEDR LMQAHRIYGN 180 KWAMIARLFP GRTDNAVKNH WHVIMARKYR EQSRSYRRRK LSQSVYRKME QDLSFLNLPK 240 DGDNPHTSTC SSPFGNFQAS VGGLDYGFLT QMPIGGEGEK PISNNHPYFA SCAQLSAFNA 300 LPDPKSRLWD GTGNGFLKPR SHHQYQPCNT AAPPSSHGVG GSQAHTASHV VRGGSSSVTA 360 ETTKSPPPFI DFLGVGAT

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MEAFDLDLNC AVVSSGVCDS QEESYASGRS CEVENGGGGF WKFPFSCESM TRSSETDVAD  60
GNYATSDFSD GFVVENNINE SSLNHIPHPN PSSCSNAASG AQSRLCARGH WRPAEDTKLR  120
ELVALYGPQN WNLIAEKLEG RSGKSCRLRW FNQLDPRINR RAFNEEEEDR LMQAHRIYGN  180
KWAMIARLFP GRTDNAVKNH WHVIMARKYR EQSRSYRRRK LSQSVYRKME QDLSFLNLPK  240
DGDNPHTSTC SSPFGNFQAS VGGLDYGFLT QMPIGGEGEK PISNNHPYFA SCAQLSAFNA  300
LPDPKSRLWD GTGNGFLKPR SHHQYQPCNT AAPPSSHGVG GSQAHTASHV VRGGSSSVTA  360
ETTKSPPPFI DFLGVGAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	6e-76	MYB family protein