PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022151186.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 495aa MW: 55832.1 Da PI: 7.1482

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022151186.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.5	6.3e-10	305	350	5	55
HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 + + Er+RR++i++++ Lr l+P+ + K++ a+i A++YI++L+ XP_022151186.1 305 NLITERKRRNKIRDRLYALRALVPNiS------KMDRASIIVDAINYIRELE 350 5678*******************66......**************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 495 aa Download sequence
MRSFERALQC LRALVETKVW DYCIVWKSRD DSSRFIDWVG CCCSGGNAGA GAGKEEAGEP 60 NPAATLCKDS QFQHFRSTNA CQALAQFPSS IRLNSGIHGD VLISNQPMWV TSAEVSSTSS 120 FSLELTGTRV LIPISAGIVE LFATKHIPRE GEVIDFVVAL CNFSLEQEVD TESELDGGLK 180 EQSLQSSPKY YSVNWPDSQP FVDFKSKLEI LPSVSQSSSF PSCEGSSSAS KPSNEHQYLD 240 SYSSLVSREF LNQPIRRSFG SKKPMPQEDL LKQQRDEVSG YSKILEKDEA KIGGRQGKEI 300 YKSKNLITER KRRNKIRDRL YALRALVPNI SKMDRASIIV DAINYIRELE ENAKSLQNEL 360 IQLEHKDSQK NKQHLKISPL ERKNDDTTCR SLVQHDRPTL XLGEEKPSEV EVEVMQINER 420 DFIIKLFCVR KQGGVVRSIE AMDSLGLQVV DVNITTFGSM VLNIFHVEAN ENDIQPKRLR 480 DSLIKLTSRE IRRIK

Sequence ? help Back to Top

Protein Sequence Length: 495 aa Download sequence

MRSFERALQC LRALVETKVW DYCIVWKSRD DSSRFIDWVG CCCSGGNAGA GAGKEEAGEP  60
NPAATLCKDS QFQHFRSTNA CQALAQFPSS IRLNSGIHGD VLISNQPMWV TSAEVSSTSS  120
FSLELTGTRV LIPISAGIVE LFATKHIPRE GEVIDFVVAL CNFSLEQEVD TESELDGGLK  180
EQSLQSSPKY YSVNWPDSQP FVDFKSKLEI LPSVSQSSSF PSCEGSSSAS KPSNEHQYLD  240
SYSSLVSREF LNQPIRRSFG SKKPMPQEDL LKQQRDEVSG YSKILEKDEA KIGGRQGKEI  300
YKSKNLITER KRRNKIRDRL YALRALVPNI SKMDRASIIV DAINYIRELE ENAKSLQNEL  360
IQLEHKDSQK NKQHLKISPL ERKNDDTTCR SLVQHDRPTL XLGEEKPSEV EVEVMQINER  420
DFIIKLFCVR KQGGVVRSIE AMDSLGLQVV DVNITTFGSM VLNIFHVEAN ENDIQPKRLR  480
DSLIKLTSRE IRRIK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16910.1	3e-73	bHLH family protein