PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022150639.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

NAC

Protein Properties

Length: 419aa MW: 46961.4 Da PI: 4.6501

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022150639.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	105.5	6.9e-33	58	197	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.....lelee.....vikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atk....s 80 lp+G++F+P+d+e++++ L+k g + + + v+++ +i++++P++Lp vk++ + +fF+++ k+y+tg+rk+r +t+ + XP_022150639.1 58 LPRGVKFDPSDQEIIWHLLAKVGIGGSkphpfI---DefiptVLEDDGICYTHPQKLP-GVKQDGSVSHFFHRAIKAYNTGTRKRRkITDddfgD 148 799**********888877744444465552...233343577778******.677888899**************555466557 PP NAM 81 gyWkatgkdkevlskkgelvglkktLvfykg..rapkgektdWvmheyrl 128 +W++tg++k+v+ +g ++g+kk++v+y r ++ekt+Wvmh+y+l XP_022150639.1 149 VRWHKTGRTKPVVI-NGVQKGCKKIMVLYMSfvRGGRAEKTNWVMHQYHL 197 88********.999*******5434888889*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 419 aa Download sequence
MARPSWLVDS NRIATKIKSA SGTSNPRSVE WKSNPSRSCP NCQHTIDNSD VAQEWPGLPR 60 GVKFDPSDQE IIWHLLAKVG IGGSKPHPFI DEFIPTVLED DGICYTHPQK LPGVKQDGSV 120 SHFFHRAIKA YNTGTRKRRK ITDDDFGDVR WHKTGRTKPV VINGVQKGCK KIMVLYMSFV 180 RGGRAEKTNW VMHQYHLGTE EDERDGEYVL SKIFFQQQNV KQGEVTEQEI PEIIDAVKVD 240 PRTPKSVTPE PPRIESRSAD VDPEPDSVIT STSTLPQVPP EFEKLDNPDI VKLDGCSDEV 300 IDDNENQLEE EPKWWEGESQ NILDSQQLVE ALSLCDDLLQ SQSPPREGNS TNGASGSKSC 360 LSEYAKLGPE DLKKDLEECQ NLVLDPANIE LDTPPEFRLS QLDFGSQESF LAWGGKVVE

Sequence ? help Back to Top

Protein Sequence Length: 419 aa Download sequence

MARPSWLVDS NRIATKIKSA SGTSNPRSVE WKSNPSRSCP NCQHTIDNSD VAQEWPGLPR  60
GVKFDPSDQE IIWHLLAKVG IGGSKPHPFI DEFIPTVLED DGICYTHPQK LPGVKQDGSV  120
SHFFHRAIKA YNTGTRKRRK ITDDDFGDVR WHKTGRTKPV VINGVQKGCK KIMVLYMSFV  180
RGGRAEKTNW VMHQYHLGTE EDERDGEYVL SKIFFQQQNV KQGEVTEQEI PEIIDAVKVD  240
PRTPKSVTPE PPRIESRSAD VDPEPDSVIT STSTLPQVPP EFEKLDNPDI VKLDGCSDEV  300
IDDNENQLEE EPKWWEGESQ NILDSQQLVE ALSLCDDLLQ SQSPPREGNS TNGASGSKSC  360
LSEYAKLGPE DLKKDLEECQ NLVLDPANIE LDTPPEFRLS QLDFGSQESF LAWGGKVVE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	1e-180	NAC family protein