PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022150009.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family NF-YA
Protein Properties Length: 320aa    MW: 35715.5 Da    PI: 6.9483
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022150009.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA104.96.8e-33149205158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep+YVNaKQy++Il+RRq+Rak+e ekk+ +ksrkpylheSRh hA+rR+RgsgGrF
  XP_022150009.1 149 EEPVYVNAKQYHGILRRRQSRAKAELEKKV-IKSRKPYLHESRHLHAMRRARGSGGRF 205
                     69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MPSKPENVDQ QVTDGVKYVL QSTKYSEPWW HGVGNNTAVG EDPIRTSSAD YLNVTVSSGA  60
TQSQANDENI EKEVQHLKYI PFSTSPPVGE HLDLNSHMEL VGHSIVLTSY PFSDAQYGQM  120
LTSYGPQSML PHFYGLHHGR MPLPLDMEEE PVYVNAKQYH GILRRRQSRA KAELEKKVIK  180
SRKPYLHESR HLHAMRRARG SGGRFLNTKK LNNVISNTST EEDFNSGANH FTKSVSEAGS  240
NYMATDENGV KDTHDDQQEG SRGFMNQNMH ITHAFFDGKS NGHGLSTYNS QLSDVEGGHL  300
GQPHESMQVN GAPQRAIPIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20910.14e-45NF-YA family protein