PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022149303.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB_related

Protein Properties

Length: 571aa MW: 62918.7 Da PI: 6.3524

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022149303.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.6	2.9e-08	451	499	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +lv++v + G g+W+ I r Rt ++k++w+++l XP_022149303.1 451 AWTLVEVIKLVEGVSKCGAGRWSEIKRLAFssySYRTSVDLKDKWRNLL 499 7*************************99999************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 571 aa Download sequence
MEVEDLIEDD KSEKIADAGQ IVGCVPTEGA LFGKPHLEIS NDMPGLSQSE TFEADAGYNA 60 RLEYIEEVLQ KVKEEERLRL ACGSPNHASA YVNGDRKCSD QHGRLPVIDE KLQSKISQQE 120 IAHSISPSLN ENHVNEHESL GDCLKHPDEL VESESSDAVG TTSNPDFSLL KGEICLDNLS 180 IRELHEYFRA TFGRETTVKD KSWLKRRIAM GLTNSCDIPP SSFIIREGKF VAGGMEECSQ 240 NVEGMSNVPL VKALNIECKG SPTTHSWENK NHSCIADMEL DHGSKDRLDE ERAAVKRIRK 300 PTRRYIEELS EVELREHGQK GASLYKNAPS DGTSSSSIAR PIKKIISSDG GRTIITRMDT 360 LGGSGFQVPC VSRVRRSRPR KDIEALLFAP PDKDQNPSVK DTDQNTSVMD TEEVEKNLEP 420 KLTASGNNAS DDNAAIVPTS KGGMRRKHHR AWTLVEVIKL VEGVSKCGAG RWSEIKRLAF 480 SSYSYRTSVD LKDKWRNLLK ASSAQTPVDE VVSSRKHVSV SIPAQILLRV RELAEMHAQI 540 ASNHHHGPAV AAAAAGVTPT NMHEMTSAVC L

Sequence ? help Back to Top

Protein Sequence Length: 571 aa Download sequence

MEVEDLIEDD KSEKIADAGQ IVGCVPTEGA LFGKPHLEIS NDMPGLSQSE TFEADAGYNA  60
RLEYIEEVLQ KVKEEERLRL ACGSPNHASA YVNGDRKCSD QHGRLPVIDE KLQSKISQQE  120
IAHSISPSLN ENHVNEHESL GDCLKHPDEL VESESSDAVG TTSNPDFSLL KGEICLDNLS  180
IRELHEYFRA TFGRETTVKD KSWLKRRIAM GLTNSCDIPP SSFIIREGKF VAGGMEECSQ  240
NVEGMSNVPL VKALNIECKG SPTTHSWENK NHSCIADMEL DHGSKDRLDE ERAAVKRIRK  300
PTRRYIEELS EVELREHGQK GASLYKNAPS DGTSSSSIAR PIKKIISSDG GRTIITRMDT  360
LGGSGFQVPC VSRVRRSRPR KDIEALLFAP PDKDQNPSVK DTDQNTSVMD TEEVEKNLEP  420
KLTASGNNAS DDNAAIVPTS KGGMRRKHHR AWTLVEVIKL VEGVSKCGAG RWSEIKRLAF  480
SSYSYRTSVD LKDKWRNLLK ASSAQTPVDE VVSSRKHVSV SIPAQILLRV RELAEMHAQI  540
ASNHHHGPAV AAAAAGVTPT NMHEMTSAVC L

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	375	381	RRSRPRK
2	375	382	RRSRPRKD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.2	7e-95	MYB_related family protein