PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022149263.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB_related

Protein Properties

Length: 627aa MW: 68907.3 Da PI: 5.6297

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022149263.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.4	3.3e-08	507	555	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +lv++v + G g+W+ I r Rt ++k++w+++l XP_022149263.1 507 AWTLVEVIKLVEGVSKCGAGRWSEIKRLAFssySYRTSVDLKDKWRNLL 555 7*************************99999************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 627 aa Download sequence
METVVGFVEN GGNIEEGRVA LDDSTLSPNQ IADPVVYKLV RVDGDGRFVP ATDDEVMEVE 60 DLIEDDKSEK IADAGQIVGC VPTEGALFGK PHLEISNDMP GLSQSETFEA DAGYNARLEY 120 IEEVLQKVKE EERLRLACGS PNHASAYVNG DRKCSDQHGR LPVIDEKLQS KISQQEIAHS 180 ISPSLNENHV NEHESLGDCL KHPDELVESE SSDAVGTTSN PDFSLLKGEI CLDNLSIREL 240 HEYFRATFGR ETTVKDKSWL KRRIAMGLTN SCDIPPSSFI IREGKFVAGG MEECSQNVEG 300 MSNVPLVKAL NIECKGSPTT HSWENKNHSC IADMELDHGS KDRLDEERAA VKRIRKPTRR 360 YIEELSEVEL REHGQKGASL YKNAPSDGTS SSSIARPIKK IISSDGGRTI ITRMDTLGGS 420 GFQVPCVSRV RRSRPRKDIE ALLFAPPDKD QNPSVKDTDQ NTSVMDTEEV EKNLEPKLTA 480 SGNNASDDNA AIVPTSKGGM RRKHHRAWTL VEVIKLVEGV SKCGAGRWSE IKRLAFSSYS 540 YRTSVDLKDK WRNLLKASSA QTPVDEVVSS RKHVSVSIPA QILLRVRELA EMHAQIASNH 600 HHGPAVAAAA AGVTPTNMHE MTSAVCL

Sequence ? help Back to Top

Protein Sequence Length: 627 aa Download sequence

METVVGFVEN GGNIEEGRVA LDDSTLSPNQ IADPVVYKLV RVDGDGRFVP ATDDEVMEVE  60
DLIEDDKSEK IADAGQIVGC VPTEGALFGK PHLEISNDMP GLSQSETFEA DAGYNARLEY  120
IEEVLQKVKE EERLRLACGS PNHASAYVNG DRKCSDQHGR LPVIDEKLQS KISQQEIAHS  180
ISPSLNENHV NEHESLGDCL KHPDELVESE SSDAVGTTSN PDFSLLKGEI CLDNLSIREL  240
HEYFRATFGR ETTVKDKSWL KRRIAMGLTN SCDIPPSSFI IREGKFVAGG MEECSQNVEG  300
MSNVPLVKAL NIECKGSPTT HSWENKNHSC IADMELDHGS KDRLDEERAA VKRIRKPTRR  360
YIEELSEVEL REHGQKGASL YKNAPSDGTS SSSIARPIKK IISSDGGRTI ITRMDTLGGS  420
GFQVPCVSRV RRSRPRKDIE ALLFAPPDKD QNPSVKDTDQ NTSVMDTEEV EKNLEPKLTA  480
SGNNASDDNA AIVPTSKGGM RRKHHRAWTL VEVIKLVEGV SKCGAGRWSE IKRLAFSSYS  540
YRTSVDLKDK WRNLLKASSA QTPVDEVVSS RKHVSVSIPA QILLRVRELA EMHAQIASNH  600
HHGPAVAAAA AGVTPTNMHE MTSAVCL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	431	437	RRSRPRK
2	431	438	RRSRPRKD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.2	1e-111	MYB_related family protein