PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022149102.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | YABBY | ||||||||
Protein Properties | Length: 173aa MW: 18929.3 Da PI: 8.7002 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 151 | 1.1e-46 | 10 | 157 | 1 | 163 |
YABBY 1 advfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesasts 95 +d+++ se++Cyv+CnfCnt+lav +P l+ +vtv+CGhC++l ++ + l+ + + + l+++++ sn++++ ++++s XP_022149102.1 10 MDLVQPSEHLCYVRCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRPP---------LQG---QCIDHPLGFQTQVGFSNDIRKGASTSS 92 578999*************************************9755333322.........222...234556778888778888888887777 PP YABBY 96 vsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahf 163 +s+ s++ +e+p + v++PPek+ r Psaynrf+keeiqrika+nP+i hreafsaaaknWa + XP_022149102.1 93 TST---SSSMANESPSPSFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARY 157 777...6677888898888***********************************************76 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 173 aa Download sequence |
MSSEDSKTSM DLVQPSEHLC YVRCNFCNTV LAVGIPCRRL LDTVTVKCGH CSNLSFLSTR 60 PPLQGQCIDH PLGFQTQVGF SNDIRKGAST SSTSTSSSMA NESPSPSFVV KPPEKKHRLP 120 SAYNRFMKEE IQRIKAANPE IPHREAFSAA AKNWARYIPN SAAGSVSGTH NNE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69180.1 | 5e-68 | YABBY family protein |