PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022149092.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

C2H2

Protein Properties

Length: 467aa MW: 52385.4 Da PI: 9.5626

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022149092.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.5	0.00045	407	429	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kCp+C k F++ L H r+H XP_022149092.1 407 HKCPICFKAFKSGQALGGHKRSH 429 79******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 467 aa Download sequence
MKNYISMENS RETKFVCNFC NKSYPCGKSL GGHIRIHKNE KSTRVAEKQK ERTSIVKLQV 60 PTDRRRSKRD SESEVGNGNS SSGYGLRENP KITQRFADSG FSSRQDRFCR ECGKGFQSSD 120 TLCWHLACNS ENERESKRLE YHYRITHQNP ELVANRSVSP ERVREAAMCL MMMSKASRFS 180 GLEGLYSVAE SSDSKSSSRH FRESDTSASN SNGGLEMKEV TGRINKLEVS EYGGDNSDYE 240 NFRKEARKKV KLKVSVSGPL IDEDYKKPDV KVGVRIGGSS ADILKNSVKT KKNDDRVHTS 300 SYKYELRKRL KNDSYSPDLW EGSNKKISNG CSIHSEIVHS HHRESHTRMS NGCEWTHPSG 360 ENIINTANNS SISTPARELI ACSSGKDKSH QDTSGNEEKK LGPKRKHKCP ICFKAFKSGQ 420 ALGGHKRSHV VGSLEDASIV TRQEPITGLI DLNVPAPMED EESGRWG

Sequence ? help Back to Top

Protein Sequence Length: 467 aa Download sequence

MKNYISMENS RETKFVCNFC NKSYPCGKSL GGHIRIHKNE KSTRVAEKQK ERTSIVKLQV  60
PTDRRRSKRD SESEVGNGNS SSGYGLRENP KITQRFADSG FSSRQDRFCR ECGKGFQSSD  120
TLCWHLACNS ENERESKRLE YHYRITHQNP ELVANRSVSP ERVREAAMCL MMMSKASRFS  180
GLEGLYSVAE SSDSKSSSRH FRESDTSASN SNGGLEMKEV TGRINKLEVS EYGGDNSDYE  240
NFRKEARKKV KLKVSVSGPL IDEDYKKPDV KVGVRIGGSS ADILKNSVKT KKNDDRVHTS  300
SYKYELRKRL KNDSYSPDLW EGSNKKISNG CSIHSEIVHS HHRESHTRMS NGCEWTHPSG  360
ENIINTANNS SISTPARELI ACSSGKDKSH QDTSGNEEKK LGPKRKHKCP ICFKAFKSGQ  420
ALGGHKRSHV VGSLEDASIV TRQEPITGLI DLNVPAPMED EESGRWG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26610.1	1e-22	C2H2 family protein