PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022149063.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 559aa MW: 60259.6 Da PI: 6.8346

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022149063.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.4	6.2e-09	378	426	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+el+P + sk Ka +L + ++Y++sLq XP_022149063.1 378 NSHSLAERVRREKISERMKFLQELVPGC----SKVTGKAVMLDEIINYVQSLQ 426 58***********************9....556***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 559 aa Download sequence
MDIGDTDKFR LESSTGDSIN YSHSMSSDWR FGETTLMNIP MGLVLPGNVD VIRNQDMVGC 60 SSSTAPVVEP FSSTIWEQAA NCQNLGICNI RDQNNCSTSS NTIAISKASG CPVSLSSDID 120 RTLDISWNLS HSRLKGGVYL PNIPGPLPPS LSQLPADSSF IERAARLSCF SGGNFGDIVG 180 HFNIPEPMCA FSRGMGVIPE RRDNISRNGL VSETGGQSQR NMVDSSEASK PVSLTNEHGA 240 TGRTLPESES PLKLNDRGKL AIDGSANDSD KAEFSSGDGS GEPCMLEVTG KELSAKGFGS 300 RKRKRTGQKT ELDQANGPLQ QNGVSAKDNI DTQRKGDQNP SSTTNKGTVK HGKQAPQPSD 360 PPKEEYIHVR ARRGQATNSH SLAERVRREK ISERMKFLQE LVPGCSKVTG KAVMLDEIIN 420 YVQSLQRQVE FLSMKLATVN PRLDINIDGL LAKDILQSRA GPSSGFSSHM PITGPLPSIS 480 HHGLIPSSFP AIGSCEMLRS TINSQMTPMS GGFKERTQIK NVWDGELQNI VQMSFGMSTP 540 PSCLEIDGSD SPANTKLQS

Sequence ? help Back to Top

Protein Sequence Length: 559 aa Download sequence

MDIGDTDKFR LESSTGDSIN YSHSMSSDWR FGETTLMNIP MGLVLPGNVD VIRNQDMVGC  60
SSSTAPVVEP FSSTIWEQAA NCQNLGICNI RDQNNCSTSS NTIAISKASG CPVSLSSDID  120
RTLDISWNLS HSRLKGGVYL PNIPGPLPPS LSQLPADSSF IERAARLSCF SGGNFGDIVG  180
HFNIPEPMCA FSRGMGVIPE RRDNISRNGL VSETGGQSQR NMVDSSEASK PVSLTNEHGA  240
TGRTLPESES PLKLNDRGKL AIDGSANDSD KAEFSSGDGS GEPCMLEVTG KELSAKGFGS  300
RKRKRTGQKT ELDQANGPLQ QNGVSAKDNI DTQRKGDQNP SSTTNKGTVK HGKQAPQPSD  360
PPKEEYIHVR ARRGQATNSH SLAERVRREK ISERMKFLQE LVPGCSKVTG KAVMLDEIIN  420
YVQSLQRQVE FLSMKLATVN PRLDINIDGL LAKDILQSRA GPSSGFSSHM PITGPLPSIS  480
HHGLIPSSFP AIGSCEMLRS TINSQMTPMS GGFKERTQIK NVWDGELQNI VQMSFGMSTP  540
PSCLEIDGSD SPANTKLQS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.3	1e-101	bHLH family protein