PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022148983.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

Trihelix

Protein Properties

Length: 349aa MW: 38004.5 Da PI: 5.0864

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022148983.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	85.8	5.3e-27	41	135	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rWt+qe+l+Li++++ e+r+r g+ + +p+W++vs++++++g++r+p+qC+++w+nl++++kkike+e + +++++s +++ ++l+ XP_022148983.1 41 RWTRQEILVLIQGKKVAETRVRGGRaaslafgsgQVEPKWASVSSYCKRHGVNRGPVQCRKRWSNLAGDFKKIKEWETQIREDTESFWVMRNDLR 135 8*******************875566777777********************************************999999999999986 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MALQQLSLGP TPLDAVTNGV DARPMSTDGG DDGSKTPRLP RWTRQEILVL IQGKKVAETR 60 VRGGRAASLA FGSGQVEPKW ASVSSYCKRH GVNRGPVQCR KRWSNLAGDF KKIKEWETQI 120 REDTESFWVM RNDLRRERKL PGFFDKEVYD ILDSGSGPSP SPALALALAP APVPALTPTP 180 NSEDGKVEAE PEPVFDSSKT AAADDGLFSD FEQDETSRSP NKEVPATTAD TAIPAPTPLS 240 EKLYQPAVQG CPDQGTSNDR EAAANPETGS TSQEGRKRKR VALDGDEENI LQDELIGILE 300 KNGKLLTAQL EAQNMNFQLD REQRKHHADG LVAVLNKLAD ALGRIADKL

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MALQQLSLGP TPLDAVTNGV DARPMSTDGG DDGSKTPRLP RWTRQEILVL IQGKKVAETR  60
VRGGRAASLA FGSGQVEPKW ASVSSYCKRH GVNRGPVQCR KRWSNLAGDF KKIKEWETQI  120
REDTESFWVM RNDLRRERKL PGFFDKEVYD ILDSGSGPSP SPALALALAP APVPALTPTP  180
NSEDGKVEAE PEPVFDSSKT AAADDGLFSD FEQDETSRSP NKEVPATTAD TAIPAPTPLS  240
EKLYQPAVQG CPDQGTSNDR EAAANPETGS TSQEGRKRKR VALDGDEENI LQDELIGILE  300
KNGKLLTAQL EAQNMNFQLD REQRKHHADG LVAVLNKLAD ALGRIADKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	1e-121	Trihelix family protein