PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022148916.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family M-type_MADS
Protein Properties Length: 335aa    MW: 38435.4 Da    PI: 6.6699
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022148916.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF53.62.9e-171152344
                    --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTS CS
          SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstg 44
                    i n+  r++tf kR++ ++ KA+ELS+LCd++ +v + ++++
  XP_022148916.1 11 IPNEKSRKTTFFKRKKSLMRKAYELSTLCDVRTCVFVCGPNQ 52
                    78999**********************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MGRGKLSMTM IPNEKSRKTT FFKRKKSLMR KAYELSTLCD VRTCVFVCGP NQNDQSSVEV  60
HTWPPSRDDV DDMIASYRAN CLHKRAGKPF DLLDFFSERK KKIESDISKL HKDLARAKFP  120
KWDERLDYLL EDQLRVLMEE LDSKLDATKR KIEIAMENLE EGASSSTGRS RQITLNTNMK  180
QEQNSYGMFG SCLGVETQAN LMPFHHQYQN LQSLQMDHEL DNNLSPFLIG SSQGPSTTQI  240
QLNYGSFQNP NIYNDPTMVM ESSQNYSLCH YGVPLPPHSI LPLSYMQLSD DQLMMACASS  300
NSHQMGLANF NASAQLNNDH FDYNSYEYFM KSNNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G55690.15e-15M-type_MADS family protein