PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022148722.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family NF-YA
Protein Properties Length: 344aa    MW: 37658.1 Da    PI: 7.1325
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022148722.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA102.24.7e-32169225158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep++VNaKQyq+Il+RRq+Rak+e e+kl +k rkpylheSRh+hA+rR+RgsgGrF
  XP_022148722.1 169 QEPVFVNAKQYQGILRRRQARAKAEVENKL-IKVRKPYLHESRHQHAMRRARGSGGRF 225
                     69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MHSKSKSVNQ LESEPPNMQQ TGSYSEPWWR SIGYNPISPP AAGGNVSNST SLECTNGASE  60
SNEGQSMSND DLNEEDDDDN TKDSQAASYG QEQHNTQRAV STAPTVHGGC ITQPPQLELV  120
GHNIACASNP YQDPYYPGLM TAYGHQPLGY PPFLGMPHAR MALPLEVTQE PVFVNAKQYQ  180
GILRRRQARA KAEVENKLIK VRKPYLHESR HQHAMRRARG SGGRFAKKSE VNSSCSTMKD  240
KECGSGQAIS SHSASSSGSE AVPRVLAETW NSSNGQQEAR TQLHETYEAR TYVNGSSHFQ  300
NYSSFQASSY ALRTGERGED GDCSGQQRGS ISENQAAQRR LAIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.23e-77NF-YA family protein