PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022148609.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

Protein Properties

Length: 410aa MW: 47168.8 Da PI: 9.6785

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022148609.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	49.4	8.4e-16	22	107	3	94
EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 +l+ s++ + + l++p +f++ + + s tl+ ++g +W+v l rk ++++++++GW +F + +++g f+vF+++g+s+f +v XP_022148609.1 22 HKLILSSTIQARKLRIPDTFLRMIRDE--LSAVATLTVPDGHVWRVGL--RKADNKFWFEDGWHGFLEHYSIRVGYFLVFRYEGNSSF--CV 107 5566677777778******999754..8889***********..********************************9998..43 PP
2	B3	61.8	1.2e-19	287	377	4	98
E-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 4 vltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 vl ps+ + ++++lp fae++ +g++ ++l++++gr+W v++ y+ + r l++GW eF+ +n+L egD++vF+l + +e l+v++f XP_022148609.1 287 VLRPSYLYRGCIMYLPSCFAEKNlSGVSG---FIKLQTPDGRQWPVRCLYKVG--RAKLSQGWYEFCLENNLGEGDVCVFELLRMREIVLKVTMF 376 78899****************866743...5***********55555..566*********************98767776777777 PP - CS B3 98 r 98 r XP_022148609.1 377 R 377 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 410 aa Download sequence
MTDFSAFRTG GFKRKMPRPY FHKLILSSTI QARKLRIPDT FLRMIRDELS AVATLTVPDG 60 HVWRVGLRKA DNKFWFEDGW HGFLEHYSIR VGYFLVFRYE GNSSFCVFMF NLNTSEINYQ 120 SAALGGNQRN NYSIQNRIFE EMEDYDIPEG IPSNQSMNSG SLRNKLFGDE WNLHQSKAAS 180 TLQAEYLSTR DIGVQFSAVE VKKSADEVRF QNLGDDVHRV KKSGSKKRKI DSSEHHPSTH 240 SEDLGDIRFR FYESASARKR TVTAEERERA INAAKAFEPA NPFCRVVLRP SYLYRGCIMY 300 LPSCFAEKNL SGVSGFIKLQ TPDGRQWPVR CLYKVGRAKL SQGWYEFCLE NNLGEGDVCV 360 FELLRMREIV LKVTMFRVIE DAGRLVNPNP ASMMNPPPLR SVTQIKLIRN

Sequence ? help Back to Top

Protein Sequence Length: 410 aa Download sequence

MTDFSAFRTG GFKRKMPRPY FHKLILSSTI QARKLRIPDT FLRMIRDELS AVATLTVPDG  60
HVWRVGLRKA DNKFWFEDGW HGFLEHYSIR VGYFLVFRYE GNSSFCVFMF NLNTSEINYQ  120
SAALGGNQRN NYSIQNRIFE EMEDYDIPEG IPSNQSMNSG SLRNKLFGDE WNLHQSKAAS  180
TLQAEYLSTR DIGVQFSAVE VKKSADEVRF QNLGDDVHRV KKSGSKKRKI DSSEHHPSTH  240
SEDLGDIRFR FYESASARKR TVTAEERERA INAAKAFEPA NPFCRVVLRP SYLYRGCIMY  300
LPSCFAEKNL SGVSGFIKLQ TPDGRQWPVR CLYKVGRAKL SQGWYEFCLE NNLGEGDVCV  360
FELLRMREIV LKVTMFRVIE DAGRLVNPNP ASMMNPPPLR SVTQIKLIRN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	1e-142	B3 family protein