PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022148454.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

C2H2

Protein Properties

Length: 343aa MW: 38560.9 Da PI: 10.7324

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022148454.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.7	4.6e-06	250	273	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++C+ Cg+ F+r+ +L++H++ H XP_022148454.1 250 FPCTACGEIFPRPQLLEQHQSAkH 273 89******************9877 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MLNLKNNLVL LLIIQRAELR YEVALHLLFI SFILVLPPHS DISFSQSSPL IHFPPLSFSI 60 LLHCSKFLQI SLHHLLQWRR YLTDLSFISS LFSFLSSLMI MAPTAGSFST KFLALLLLIV 120 HVGCFLLTSA DHRRRHRNQP SKKRRVSPVS SPAPAPTPSC LKPHKALSSS ISFLKRIFSS 180 KTCKMAIETT RPSTPARSSQ HSIVTLIQPE IQIPIPPSET PNKSPSGGAS QDSDMITAEN 240 QFFPLRNDIF PCTACGEIFP RPQLLEQHQS AKHAVSELAD SDSGKNIVRI IFETGWTSRE 300 KSPKIVRILK IHNSQKILSR FEEYRESVKA KAARNGGVKR RDE

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MLNLKNNLVL LLIIQRAELR YEVALHLLFI SFILVLPPHS DISFSQSSPL IHFPPLSFSI  60
LLHCSKFLQI SLHHLLQWRR YLTDLSFISS LFSFLSSLMI MAPTAGSFST KFLALLLLIV  120
HVGCFLLTSA DHRRRHRNQP SKKRRVSPVS SPAPAPTPSC LKPHKALSSS ISFLKRIFSS  180
KTCKMAIETT RPSTPARSSQ HSIVTLIQPE IQIPIPPSET PNKSPSGGAS QDSDMITAEN  240
QFFPLRNDIF PCTACGEIFP RPQLLEQHQS AKHAVSELAD SDSGKNIVRI IFETGWTSRE  300
KSPKIVRILK IHNSQKILSR FEEYRESVKA KAARNGGVKR RDE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G29660.1	1e-37	C2H2 family protein