PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022148321.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MYB_related
Protein Properties Length: 263aa    MW: 30089.5 Da    PI: 8.6932
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022148321.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.17.4e-1761106148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+++ +E+ l +++++++G++ W++Iar+++ gRt++++k++w++++
   XP_022148321.1  61 RGKMSSQEERLVLELHAKWGNR-WSKIARKLP-GRTDNEIKNYWRTHM 106
                      899*******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MDRARRHPTD LLCGLVWRSK MGFHSKSFRF EGGGRQLLGL NRTGKSCRLR WVNYLHPGLK  60
RGKMSSQEER LVLELHAKWG NRWSKIARKL PGRTDNEIKN YWRTHMRKKA QEKRRALSAS  120
LSSSSSSSSS SSNNSAVEFP ADTGPVKFFD SGGSEGSEVT ALSTTKKKME ENQEQGDPNG  180
YSMDDIWKDI DLSDHESLIM NQDVYSEEDC NFSCPALTSS SPWDYYCGDS LWRMEEEESK  240
LIFSGYDHNG RPRLAQANQN FFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46130.42e-72MYB_related family protein