PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022147985.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | TCP | ||||||||
Protein Properties | Length: 226aa MW: 25010.1 Da PI: 10.9768 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 111.6 | 1.1e-34 | 14 | 97 | 1 | 86 |
TCP 1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssas.nss 86 a+++kdrhsk++T++g+RdRR Rlsa++a+rf+dLqd+LG+d++s +++WL+++ak ai+ l+++ +++s + +++s+ + + + s XP_022147985.1 14 ATARKDRHSKVSTAKGPRDRRLRLSAHTAIRFYDLQDRLGYDRPSRAVDWLINKAKFAIDNLAEL--PPNSIT-DSDSQLQMQsATS 97 579**************************************************************..555344.2222222220111 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence |
MKTGAGGHIL RSGATARKDR HSKVSTAKGP RDRRLRLSAH TAIRFYDLQD RLGYDRPSRA 60 VDWLINKAKF AIDNLAELPP NSITDSDSQL QMQSATSATT SINFQGYPVD LILSPTDPPE 120 NLRLSLHNFH DSSPADSIPG EDAGLWLQQP LLGQNSEAAA AFSQRGPHSV PIRGWSYQRT 180 HPNQPFPAAD LMHRRSSVRR RGLEVKGEKT ASFRGATRLL RTIAQI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15030.2 | 2e-36 | TCP family protein |