PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022147981.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | LBD | ||||||||
Protein Properties | Length: 137aa MW: 14912.2 Da PI: 8.3297 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 145.3 | 1.8e-45 | 18 | 118 | 1 | 101 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk+lrr+C++dCv+ pyfpa+qp+kf +vhk+FGasnv+kll+++ ee+r+da+ss+vyeA+ar++dPvyG+vg+i++lq+q+e l+++la XP_022147981.1 18 PCAACKLLRRRCSQDCVFGPYFPADQPHKFSCVHKVFGASNVSKLLQEVAEEQRSDAVSSIVYEAKARIKDPVYGCVGTISSLQRQVEALQEQLA 112 7********************************************************************************************** PP DUF260 96 llkeel 101 ++++l XP_022147981.1 113 ITQAQL 118 *99885 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 137 aa Download sequence |
MATEVNMGGS CKKSAPSPCA ACKLLRRRCS QDCVFGPYFP ADQPHKFSCV HKVFGASNVS 60 KLLQEVAEEQ RSDAVSSIVY EAKARIKDPV YGCVGTISSL QRQVEALQEQ LAITQAQLLH 120 LKMAQCPTPH NVNLCSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G16530.1 | 3e-55 | LBD family protein |