PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022147889.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family WRKY
Protein Properties Length: 301aa    MW: 32221.6 Da    PI: 6.372
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022147889.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.14.4e-2976134259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+ ++itY  +Hnh+
  XP_022147889.1  76 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRVDPTKLVITYAFDHNHQ 134
                     69*************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MDRRVRTNPF VSEQEDPEPT SDDGLPLESP SDGNDSKLAA GPAPKKSRRG VQKRVVSVPI  60
GDVDGPKSKG EAYPPSDSWA WRKYGQKPIK GSPYPRGYYR CSSSKGCPAR KQVERSRVDP  120
TKLVITYAFD HNHQLPAAKS HHHHHHHHSS PSPAAITAAS AAADDSSPGS TTTSSSTSSG  180
DHTNMTPTSP SPAAKFEEAA AVFASQPELE LGGDSLLIKP CLGDFGWLAD VAYDRILEGP  240
ICGGGDIFDD ADVMVLSTRV DDVDESLFAD LGELPEGSVI FGRRAVHTDG PNRTRGRVLN  300
C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.12e-59WRKY family protein