PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022147865.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family NAC
Protein Properties Length: 332aa    MW: 37761 Da    PI: 7.9047
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022147865.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM161.72.9e-50201523128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     pGfrFhPtdeelv++yL++kve ++++l e ik++diyk++PwdLp         a+ekewyfF++r +ky+++ r+nr+t sg+Wkatg dk+v
  XP_022147865.1  20 PGFRFHPTDEELVSFYLRRKVEXRPISL-ELIKQIDIYKHNPWDLPYgscsnGGGAGEKEWYFFCRRGRKYKNSIRPNRVTGSGFWKATGIDKPV 113
                     9***************************.99***************4455443334889************************************ PP

             NAM  93 lsk...kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +s+   ++e +glkktLv+y+g+a kg+ktdW+mhe+rl
  XP_022147865.1 114 YSNggeGNECIGLKKTLVYYRGSAGKGTKTDWMMHEFRL 152
                     **97666667***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MDMDTPEVCD GEGDNEMPLP GFRFHPTDEE LVSFYLRRKV EXRPISLELI KQIDIYKHNP  60
WDLPYGSCSN GGGAGEKEWY FFCRRGRKYK NSIRPNRVTG SGFWKATGID KPVYSNGGEG  120
NECIGLKKTL VYYRGSAGKG TKTDWMMHEF RLPPPNPNPT NQKLQPNSKN FAEQAEIWTL  180
CRIFKRNVSC RRYGSSWNKQ TTTSTTTTTK TNPMMSSANN NICNNLVGAD HDHDHQKSGE  240
ISYINFSCES MIIHNQQVEK KPPILQNYPN EWNSNYNNNY YHQANISSCC SVAPSPVSSS  300
GIISPPVTNQ LDVNDFFTNS NWDELRSMVG ML
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.17e-84NAC family protein