PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022147642.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

C3H

Protein Properties

Length: 606aa MW: 67505.3 Da PI: 7.9703

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022147642.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	20.5	8.3e-07	315	336	5	26
--SGGGGTS--TTTTT-SS-SS CS zf-CCCH 5 lCrffartGtCkyGdrCkFaHg 26 lC f +G C++G++C+F+H+ XP_022147642.1 315 LCFKFTSSGSCPRGEKCNFHHD 336 56666778*************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 606 aa Download sequence
MSPPRILLCG DVSGRLNQLY KRVVSVNKSA GPFDALLCVG QFFPDSTDQL NEFMDYVEGR 60 SAIPLSTYFI GDYGVGAAKV LLASSKGSAN QGFKMDGLKI CENLHWLKGS GKFTLHGLSV 120 AYLSGRRSSD GLQFGTYTQD DVDALRAIAE EPGIIDLFLT NEWPTGVTDR ATTPDLPPGV 180 SDSLGSDSTI SELVVEIKPR YHISGTKGVF YAREPYSNVD AVHVTRFLGL APVGNKEKQK 240 FIHALSPIPS STMSATEISM KPPNTTLSPY ILTERKTDAS DSTKRPSSSV SESQYWRYDV 300 SQKRQKSGTA DGNKLCFKFT SSGSCPRGEK CNFHHDMYAR EQSQRGVCFD FLNKGKCERG 360 ADCNFKHSFQ NEVESHSGKR KLGNAGTKRS KECWFCLSSP NIESHLIVSI GESFYCALAK 420 GPLVSDHILI VPVEHFPNTL SLAPEFEAEL NRVQNRLRKY FKNQGKEVVF FEWVSKRSTH 480 ANLQAVPIPS SRTHVVQNIF DMAAQKLGFK FVVSKSDAPG EGRKSLRTQF DSNHSFFYAE 540 LPECTTLSHV IEENEIFPAQ FGREVLAGLL NMADKADWRN CTHSKEEEIK MAEEFKTRFE 600 KFDPNK

Sequence ? help Back to Top

Protein Sequence Length: 606 aa Download sequence

MSPPRILLCG DVSGRLNQLY KRVVSVNKSA GPFDALLCVG QFFPDSTDQL NEFMDYVEGR  60
SAIPLSTYFI GDYGVGAAKV LLASSKGSAN QGFKMDGLKI CENLHWLKGS GKFTLHGLSV  120
AYLSGRRSSD GLQFGTYTQD DVDALRAIAE EPGIIDLFLT NEWPTGVTDR ATTPDLPPGV  180
SDSLGSDSTI SELVVEIKPR YHISGTKGVF YAREPYSNVD AVHVTRFLGL APVGNKEKQK  240
FIHALSPIPS STMSATEISM KPPNTTLSPY ILTERKTDAS DSTKRPSSSV SESQYWRYDV  300
SQKRQKSGTA DGNKLCFKFT SSGSCPRGEK CNFHHDMYAR EQSQRGVCFD FLNKGKCERG  360
ADCNFKHSFQ NEVESHSGKR KLGNAGTKRS KECWFCLSSP NIESHLIVSI GESFYCALAK  420
GPLVSDHILI VPVEHFPNTL SLAPEFEAEL NRVQNRLRKY FKNQGKEVVF FEWVSKRSTH  480
ANLQAVPIPS SRTHVVQNIF DMAAQKLGFK FVVSKSDAPG EGRKSLRTQF DSNHSFFYAE  540
LPECTTLSHV IEENEIFPAQ FGREVLAGLL NMADKADWRN CTHSKEEEIK MAEEFKTRFE  600
KFDPNK