PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022147589.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 524aa MW: 58913.1 Da PI: 7.8772

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022147589.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.6	9.6e-13	345	390	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h + ErrRR+++N++f+ L++llP+ +K +K ++L+ + +Y++sL XP_022147589.1 345 HHVMSERRRREKLNDSFQALKSLLPPG-----TKKDKGSVLTTTRDYLSSL 390 58999******************97.....8**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 524 aa Download sequence
MQHQFFMDIA FHLHEGQRHS FLQSVMHSFG CTYICLWSYL PQPSNCLRFL DGLLQEIAVE 60 PICSSLVQLL FGEYRQLDFS VEDGLVPGRA HKHNVPCLKL EDSQLQTFAS ADVQRQFYVA 120 ARIQTSIFLG SINGEIELGF SNVSQVDIEM IISNLVPGDV PPKVPMELPL PATQPKPKPT 180 LTPNPPSSSS SSLRSLSMDS PVECSSFLFN GIQTTPHIPI LQSQQQQQQS MDSILAQARN 240 LQFPTPEALD EAMTRAILAV LSSPACSSSS SVHQPLEGLP QNYHLSVKAS GFKKYTRVLT 300 PNRKPSSGRQ SLLKRSFAFL RNLNLMRLQE RTPPTTSRPT SSQLHHVMSE RRRREKLNDS 360 FQALKSLLPP GTKKDKGSVL TTTRDYLSSL KAQVAELSRK NQQLEAQLLQ SAKTEEERRE 420 FSQESDRLFR VRVSNVPEST SERQIIDLHI ATRGETPLTN IVIGILEFLK RLDNVRVVSM 480 EGNTQLTASS SINHLTLRLI IEENEWDESA FREAVERIVS DLAR

Sequence ? help Back to Top

Protein Sequence Length: 524 aa Download sequence

MQHQFFMDIA FHLHEGQRHS FLQSVMHSFG CTYICLWSYL PQPSNCLRFL DGLLQEIAVE  60
PICSSLVQLL FGEYRQLDFS VEDGLVPGRA HKHNVPCLKL EDSQLQTFAS ADVQRQFYVA  120
ARIQTSIFLG SINGEIELGF SNVSQVDIEM IISNLVPGDV PPKVPMELPL PATQPKPKPT  180
LTPNPPSSSS SSLRSLSMDS PVECSSFLFN GIQTTPHIPI LQSQQQQQQS MDSILAQARN  240
LQFPTPEALD EAMTRAILAV LSSPACSSSS SVHQPLEGLP QNYHLSVKAS GFKKYTRVLT  300
PNRKPSSGRQ SLLKRSFAFL RNLNLMRLQE RTPPTTSRPT SSQLHHVMSE RRRREKLNDS  360
FQALKSLLPP GTKKDKGSVL TTTRDYLSSL KAQVAELSRK NQQLEAQLLQ SAKTEEERRE  420
FSQESDRLFR VRVSNVPEST SERQIIDLHI ATRGETPLTN IVIGILEFLK RLDNVRVVSM  480
EGNTQLTASS SINHLTLRLI IEENEWDESA FREAVERIVS DLAR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	350	355	ERRRRE
2	351	356	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56960.1	2e-49	bHLH family protein