PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022147581.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MYB_related
Protein Properties Length: 345aa    MW: 37229.4 Da    PI: 9.655
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022147581.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.27.9e-13125169347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ +++ + ++lG g+W+ I+r   ++Rt+ q+ s+ qky
   XP_022147581.1 125 PWTEEEHRIFLIGLEKLGRGDWRGISRNYVTTRTPTQVASHAQKY 169
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
MGRKCSHCGN IGHNSRTCSN FRPSNNNFVA ATATSGPPIR LFGVHLDPSS SSSSNYSSSP  60
NHNFAIKKSF STDCLSLPSS SPPSSSSSFS SSRIHVDADD TKPPINGYLS DGLLTREQDR  120
KKGVPWTEEE HRIFLIGLEK LGRGDWRGIS RNYVTTRTPT QVASHAQKYF LRQSTINKKN  180
RRSSLFDMVG RTKACDKTTT TASTTTANFS QCLKLSSNSQ ELSKNKDDRQ LTLPLLDRTT  240
SFGSAYNYME VINKKLDDQL MADAAAAASS SSGVWIYGLI DDSQLKCSSS PKKPNSYCSS  300
STNSSAAAGP DLELTLAAPS MASNLEQNSK KAPPGSLLVG PISVT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.12e-58MYB_related family protein