PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022147552.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

GRF

Protein Properties

Length: 330aa MW: 37731 Da PI: 8.3604

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022147552.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.8	1.1e-24	76	119	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrg++rsrk+++ XP_022147552.1 76 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVD 119 79***************************************986 PP
2	QLQ	58.6	1.8e-20	8	43	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FT aQ+q+L++Q+l++Ky++++ P+Pp+Ll+ i++ XP_022147552.1 8 PFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKR 43 8*******************************9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 330 aa Download sequence
MSARSMFPFT SAQWQELEHQ ALIFKYMVSG IPIPPDLLFS IKRSTLDSSF TSKLFPHHPQ 60 HVGWNYLQMS LGRKIDPEPG RCRRTDGKKW RCSKEAYPDS KYCERHMHRG KNRSRKPVDV 120 LKTTATNDIN HLSNPAFSSL TNNSSMLSYR PFPAHQISLT PNGNAISTQD TSTLLLLESG 180 SYSDRNPDYR YTYGLREDVD EHVFFSQEPS ETTSRTDFSA SSMADSLQLT PLSMSCSSLY 240 PKQNNCSSLQ NDQSCYQIHE SLTDPLKQQK RDESQKTVHR FFDEWPPKER GSWLDFDDKT 300 SNNGSVSTTR LSISIPTASN DFPIFRSKNP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	5e-57	GRF family protein