PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022147550.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | GRF | ||||||||
Protein Properties | Length: 333aa MW: 38130.5 Da PI: 8.7505 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 77.7 | 1.1e-24 | 76 | 119 | 1 | 44 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrg++rsrk+++ XP_022147550.1 76 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVD 119 79***************************************986 PP | |||||||
2 | QLQ | 58.6 | 1.9e-20 | 8 | 43 | 2 | 37 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FT aQ+q+L++Q+l++Ky++++ P+Pp+Ll+ i++ XP_022147550.1 8 PFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKR 43 8*******************************9985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 333 aa Download sequence |
MSARSMFPFT SAQWQELEHQ ALIFKYMVSG IPIPPDLLFS IKRSTLDSSF TSKLFPHHPQ 60 HVGWNYLQMS LGRKIDPEPG RCRRTDGKKW RCSKEAYPDS KYCERHMHRG KNRSRKPVDV 120 LKTTATNDIN HLSNPAFSSL TNNSSMLSYR PFPAHQISLT PNGNAISTQD TSTLLLLESG 180 SYSDRNPDYR RSRYTYGLRE DVDEHVFFSQ EPSETTSRTD FSASSMADSL QLTPLSMSCS 240 SLYPKQNNCS SLQNDQSCYQ IHESLTDPLK QQKRDESQKT VHRFFDEWPP KERGSWLDFD 300 DKTSNNGSVS TTRLSISIPT ASNDFPIFRS KNP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13960.1 | 7e-57 | GRF family protein |