PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022147403.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MYB_related
Protein Properties Length: 322aa    MW: 36067.9 Da    PI: 9.5694
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022147403.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.51.5e-135397147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r +WT++E++++++a +++  + Wk+I + +g  +t  q++s+ qky
   XP_022147403.1 53 RESWTEQEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 97
                     789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MSRLRGIDSV PPQTASVRTI TPATSTSYCA TAFPVSEDVS KKIRKPYTIT KSRESWTEQE  60
HDKFLEALQL FDRDWKKIEA FVGSKTVIQI RSHAQKYFLK IQKSGKSEHV PPPRPKKKAS  120
HPYPQKAPKN VTTRNPGTYQ PISSPFEQRY IYIPDSTAGF GHPCPNANIS SWSCSPVPTI  180
DVTTQVPKDG VKLAGSTFAS NCCYSSSNES TPRTWKIGEI SEQGDQSMRN RVMPDFAQVY  240
SFIGSVFDPS VSGHLQRLRQ MDPIDLETAL LLMQNLAINL LSPEFENHRR LISSHDEDLK  300
KAKSGSLYNS LCIVRSDNTI IA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.23e-94MYB_related family protein