PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022147288.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB_related

Protein Properties

Length: 506aa MW: 59199.9 Da PI: 7.9315

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022147288.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.4	2.8e-07	298	339	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +WT+eE el + + ++G++ Wk a +g + + ++k+ w+ XP_022147288.1 298 KRKWTPEEYELVRKFHDKHGSD-WKVLADALG--KHRFHVKDTWR 339 579*****************.******9..56777877776 PP

Sequence ? help Back to Top
Protein Sequence Length: 506 aa Download sequence
MATLELFAQD EDKDVTPAEM KMHKMTKTKC RDGSDKRDDG EKKKEKKEKK KKKRKEHKIR 60 KDDHKEEIES ETEHCVKKDE EKEEIEPETE PCVEKDEEMQ MQEKKNDNLS EGLHRKSHKR 120 GTDSGKEKKK KKKQKVEDSR ESSCLPINKE KKRKKTKFVE DGSPEKVHEG GAGLRENGDI 180 ASPSKRLSPK GSSKKVSFSD DVEIFPLVDG QSSEKTKQDD GLIRGKRFSK EEDEMVKKAV 240 LEYIEEHGLG DEGLKKVLHC REFPEVKNCW KDIGKALSWR PYLSVYYRAH ILFERDDKRK 300 WTPEEYELVR KFHDKHGSDW KVLADALGKH RFHVKDTWRR IKLPNMKKGH WTQDEYQKLF 360 DLVNTDLRLK AFEEKKSKHG MLRDNICWGA ISDKLSTRST ALCCQKWYRQ LTSPMVAEDE 420 WADVDDYHLI DALSSLDACS IEDVEWDQLL DHRNGDICRK RWSQMVKHIG ESANKSFSEQ 480 VEVLSKRYSI DVLDAREAYD SAPIVD

Sequence ? help Back to Top

Protein Sequence Length: 506 aa Download sequence

MATLELFAQD EDKDVTPAEM KMHKMTKTKC RDGSDKRDDG EKKKEKKEKK KKKRKEHKIR  60
KDDHKEEIES ETEHCVKKDE EKEEIEPETE PCVEKDEEMQ MQEKKNDNLS EGLHRKSHKR  120
GTDSGKEKKK KKKQKVEDSR ESSCLPINKE KKRKKTKFVE DGSPEKVHEG GAGLRENGDI  180
ASPSKRLSPK GSSKKVSFSD DVEIFPLVDG QSSEKTKQDD GLIRGKRFSK EEDEMVKKAV  240
LEYIEEHGLG DEGLKKVLHC REFPEVKNCW KDIGKALSWR PYLSVYYRAH ILFERDDKRK  300
WTPEEYELVR KFHDKHGSDW KVLADALGKH RFHVKDTWRR IKLPNMKKGH WTQDEYQKLF  360
DLVNTDLRLK AFEEKKSKHG MLRDNICWGA ISDKLSTRST ALCCQKWYRQ LTSPMVAEDE  420
WADVDDYHLI DALSSLDACS IEDVEWDQLL DHRNGDICRK RWSQMVKHIG ESANKSFSEQ  480
VEVLSKRYSI DVLDAREAYD SAPIVD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	46	54	KKEKKKKKR
2	49	55	KKKKKRK
3	50	55	KKKKRK
4	128	155	KKKKKKQKVEDSRESSCLPINKEKKRKK
5	128	157	KKKKKKQKVEDSRESSCLPINKEKKRKKTK
6	129	156	KKKKKKQKVEDSRESSCLPINKEKKRKK
7	129	158	KKKKKKQKVEDSRESSCLPINKEKKRKKTK
8	130	157	KKKKKKQKVEDSRESSCLPINKEKKRKK
9	130	159	KKKKKKQKVEDSRESSCLPINKEKKRKKTK
10	151	155	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41020.1	1e-132	MYB_related family protein