PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022147239.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family HD-ZIP
Protein Properties Length: 224aa    MW: 25764.6 Da    PI: 5.2819
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022147239.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.99.4e-202679356
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                    +R++f++eq++ Le+ Fe+++ +  +++ +LA +lgL  rqV +WFqN+Ra++k
  XP_022147239.1 26 NRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQVAIWFQNKRARWK 79
                    699**************************************************9 PP
2HD-ZIP_I/II117.95.8e-3826112288
     HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLr 88 
                     ++rr+s+eq+k+LE+ Fe+e++Lep++K +la eLgl+prqva+WFqn+RAR+k+kqlE+dy+ L+++y++l+++ e+L+ke+++L+
  XP_022147239.1  26 NRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQVAIWFQNKRARWKSKQLERDYTLLRANYNNLASRFEALKKEKQALN 112
                     589**********************************************************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MLNDEAEYSP PASMAEALAT RKKSMNRRRF SEEQIKSLES IFESESRLEP RKKLQLAGEL  60
GLHPRQVAIW FQNKRARWKS KQLERDYTLL RANYNNLASR FEALKKEKQA LNIQRSMEET  120
ESCRGGLSVE TIDGKSENGH RVKYESEVKP SVSAEELEKS EHELEVLSNY GSGIKEDYIG  180
LEEPQLREPA QGSLTSSTPN WNNLDSEGLF SQSNTSGQWW DFWS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46680.21e-56HD-ZIP family protein