PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022147090.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | LBD | ||||||||
Protein Properties | Length: 226aa MW: 24153.8 Da PI: 8.9779 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 122.1 | 3e-38 | 20 | 119 | 1 | 99 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 +C aCk+lrrkC ++C++apyf +eq +++fa+vhk+FGasnv+kll ++pe++r da+ +++yeA+ar+r+Pv G+v++i++lq+q ++l+ael XP_022147090.1 20 PCGACKFLRRKCLPGCIFAPYFDSEQgTAHFAAVHKVFGASNVSKLLLHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQEQAARLRAEL 114 7***********************9989******************************************************************* PP DUF260 95 allke 99 ++l++ XP_022147090.1 115 SYLQA 119 99886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence |
MSTGRSGGSC TGGNGGGSGP CGACKFLRRK CLPGCIFAPY FDSEQGTAHF AAVHKVFGAS 60 NVSKLLLHIP EHKRLDAAIT ICYEAQARVR EPVLGCVAHI FALQEQAARL RAELSYLQAY 120 LAASELRRPQ SNLQAQPPPL IKPSLPSISN LPLDSPSLPV SSDLSLLLDP VVQASGSKPQ 180 SPFESCQIGS NNFPSMAGRD QRLIYKQLSS MQCIGASLFP YLPKRA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45420.1 | 9e-59 | LBD family protein |