PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022146890.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

HSF

Protein Properties

Length: 468aa MW: 52296.9 Da PI: 6.8383

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022146890.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	110.9	9.3e-35	18	108	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl k+y++++d+++++++sw+++++sfvv+++ efa+ +Lp+yFkh+nf+SF+RQLn+YgF+k+++e+ weF+++ F k++k+ll++ XP_022146890.1 18 FLIKTYDMVDDSATDSIVSWTSSNKSFVVWNPPEFARLLLPTYFKHNNFSSFIRQLNTYGFRKIDSER---------WEFANEDFIKDQKHLLKN 103 9**************************************************************999.........************** PP XXXXX CS HSF_DNA-bind 97 ikrkk 101 i+r+k XP_022146890.1 104 IHRRK 108 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 468 aa Download sequence
MEAAAGGGGA GGAGPAPFLI KTYDMVDDSA TDSIVSWTSS NKSFVVWNPP EFARLLLPTY 60 FKHNNFSSFI RQLNTYGFRK IDSERWEFAN EDFIKDQKHL LKNIHRRKPI HSHSNPQGSL 120 VDPERAAFED EIERLSREKA TLEANISRFK QQKSTAKHQV RDLTVKVESM EKRQKSLLAF 180 LEKAVQNPSF VEHLARRVES MDFTAFNKKR RLPQADHPQP LIENSFLDNH SSSRSESGNI 240 FHQDFSHKLR LESSTVSDVN LISCSTQSSN EEGGSSQRNM SKIDTRGVQE NLHFATETLD 300 LSDTGTSFIL KRDSSLSGKS PNDESPRLSQ PSASSKEDGE SHISCHLNLT LASSSLRVND 360 TACSVRMPQL GQTARKSPDS NGKEADMRLF TKNINLDERT TPFCPQENLS NHHGPSAAAA 420 AAPVRANDFF WEQFLTERPG CPESEEASSN YRATLYKEPD DGRSGLSL

Sequence ? help Back to Top

Protein Sequence Length: 468 aa Download sequence

MEAAAGGGGA GGAGPAPFLI KTYDMVDDSA TDSIVSWTSS NKSFVVWNPP EFARLLLPTY  60
FKHNNFSSFI RQLNTYGFRK IDSERWEFAN EDFIKDQKHL LKNIHRRKPI HSHSNPQGSL  120
VDPERAAFED EIERLSREKA TLEANISRFK QQKSTAKHQV RDLTVKVESM EKRQKSLLAF  180
LEKAVQNPSF VEHLARRVES MDFTAFNKKR RLPQADHPQP LIENSFLDNH SSSRSESGNI  240
FHQDFSHKLR LESSTVSDVN LISCSTQSSN EEGGSSQRNM SKIDTRGVQE NLHFATETLD  300
LSDTGTSFIL KRDSSLSGKS PNDESPRLSQ PSASSKEDGE SHISCHLNLT LASSSLRVND  360
TACSVRMPQL GQTARKSPDS NGKEADMRLF TKNINLDERT TPFCPQENLS NHHGPSAAAA  420
AAPVRANDFF WEQFLTERPG CPESEEASSN YRATLYKEPD DGRSGLSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13980.1	1e-146	HSF family protein