PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022146730.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

HSF

Protein Properties

Length: 390aa MW: 44718.6 Da PI: 4.5896

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022146730.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	104.2	1.1e-32	16	107	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+kly++++de+++++isws + +sf +ld+++f+ +LpkyFkhsnf+SF+RQLn+YgF+k++++ weF+ + F kg+k+ll++ XP_022146730.1 16 FLNKLYQMVDDEATNSIISWSPTDDSFTILDMTQFSVLLLPKYFKHSNFSSFMRQLNIYGFRKIDTDC---------WEFATDGFVKGQKHLLKN 101 9******************999************************************9987.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i r+k+ XP_022146730.1 102 ICRRKN 107 *997 PP

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence
MVKSAAERKG PSAAPFLNKL YQMVDDEATN SIISWSPTDD SFTILDMTQF SVLLLPKYFK 60 HSNFSSFMRQ LNIYGFRKID TDCWEFATDG FVKGQKHLLK NICRRKNIQG TDQRKASQPA 120 QENSEGQGEL HDYTGLWKEV ENLKIDKNAL MQELVKLRQH QETSENKLLL LRDRLQGMEK 180 NQQQMLSFLV MAVQSPGFLV QFLQPKEKNW RMAEAGTILE QIPDDNQVPS NGMIVRYQRP 240 LDELPATLLP PVSGSGKHQE SEPFPEGMKD FFLNSDFMKV LMDEKLCLDN HSPFVLPDVQ 300 DIAWEQLLLA SHFSGNSENG RKVDDELDME TTDTGTDEEK SQDFELLVRQ MEKCENSGMP 360 LRFDESCIEK SNTVNLLTQQ MELLASDQET

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence

MVKSAAERKG PSAAPFLNKL YQMVDDEATN SIISWSPTDD SFTILDMTQF SVLLLPKYFK  60
HSNFSSFMRQ LNIYGFRKID TDCWEFATDG FVKGQKHLLK NICRRKNIQG TDQRKASQPA  120
QENSEGQGEL HDYTGLWKEV ENLKIDKNAL MQELVKLRQH QETSENKLLL LRDRLQGMEK  180
NQQQMLSFLV MAVQSPGFLV QFLQPKEKNW RMAEAGTILE QIPDDNQVPS NGMIVRYQRP  240
LDELPATLLP PVSGSGKHQE SEPFPEGMKD FFLNSDFMKV LMDEKLCLDN HSPFVLPDVQ  300
DIAWEQLLLA SHFSGNSENG RKVDDELDME TTDTGTDEEK SQDFELLVRQ MEKCENSGMP  360
LRFDESCIEK SNTVNLLTQQ MELLASDQET

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67970.1	1e-104	HSF family protein