PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022146530.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

FAR1

Protein Properties

Length: 780aa MW: 90285.6 Da PI: 6.7838

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022146530.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	85.7	7.4e-27	58	144	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY++YAk++GF + k +s++s+ ++e+++++f C ++g++++++++ ++r++ ++gCka+++vk++++gkw+v++++++HnHel p XP_022146530.1 58 SFYKDYAKSMGFGTAKLSSRRSRASKEFIDAKFSCIRYGNKQQSDDA----INPRPSPKIGCKASMHVKRRQNGKWYVYSFVKDHNHELLP 144 5**************************************999877....9**********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 780 aa Download sequence
MGRCMKNIRS SLSSFRGEIN GGFEVDLNFP SSIMDSNAIM GVEPCLGMEF ESHEDAYSFY 60 KDYAKSMGFG TAKLSSRRSR ASKEFIDAKF SCIRYGNKQQ SDDAINPRPS PKIGCKASMH 120 VKRRQNGKWY VYSFVKDHNH ELLPSQVHLF RSHRNIDPLK NDVRIRRRKN LAAMSKLFSA 180 YQNVDCLESY VRNQHDKGRT LVLESGDAQI LLELFMHMQE ENPKFFYAVD LNEEHQLRNV 240 FWVDGKGMED YAHFGDVVSL DTTYFTNKYK LPLVLFIGVN HHIQPTLLGC ALIADETVYT 300 FLWLIQTWFI AMGERAPKVI LTDQNNSIKA VIEAVLPGTR HYFCLWYILE RIPKALEFLS 360 MWHETFMEKF KKCIFKSWTK EQFEKRWQKL LDRFNLREVE WMQYLYDDRA YWVPAFARDV 420 SFAGLCTSLR MESLNSCFDK YVQMETSLTE FIERYRDILE ERYEEEAKSN FDAWHETPEL 480 KSPSPFEKQM SLVYTHEIFK KFQMEVLGAA ACHLKKETED ETTTTYTVKD FEDGQNYVIE 540 CSDSKSDIYC SCRSFEYKGF LCRHAIIVLQ MSGIFSIPSK YILQRWTNTA MSMNPINEKL 600 DEVQCKVRRF NDLCRRAIIL GEEGSLSQES YDIALSAINE ALKQCATVHS SVESDVRPDT 660 SAILVFGIED DNQCSNLAVD NAPDLKVINT KKSSKRAGSS KESAVNENNK NGKVPQLLDT 720 NARSQDDFNQ MQDLSNVRPI QLQISSAQFH NMVPTLLHNV TSTQFHSMPS AHLHENRLPP

Sequence ? help Back to Top

Protein Sequence Length: 780 aa Download sequence

MGRCMKNIRS SLSSFRGEIN GGFEVDLNFP SSIMDSNAIM GVEPCLGMEF ESHEDAYSFY  60
KDYAKSMGFG TAKLSSRRSR ASKEFIDAKF SCIRYGNKQQ SDDAINPRPS PKIGCKASMH  120
VKRRQNGKWY VYSFVKDHNH ELLPSQVHLF RSHRNIDPLK NDVRIRRRKN LAAMSKLFSA  180
YQNVDCLESY VRNQHDKGRT LVLESGDAQI LLELFMHMQE ENPKFFYAVD LNEEHQLRNV  240
FWVDGKGMED YAHFGDVVSL DTTYFTNKYK LPLVLFIGVN HHIQPTLLGC ALIADETVYT  300
FLWLIQTWFI AMGERAPKVI LTDQNNSIKA VIEAVLPGTR HYFCLWYILE RIPKALEFLS  360
MWHETFMEKF KKCIFKSWTK EQFEKRWQKL LDRFNLREVE WMQYLYDDRA YWVPAFARDV  420
SFAGLCTSLR MESLNSCFDK YVQMETSLTE FIERYRDILE ERYEEEAKSN FDAWHETPEL  480
KSPSPFEKQM SLVYTHEIFK KFQMEVLGAA ACHLKKETED ETTTTYTVKD FEDGQNYVIE  540
CSDSKSDIYC SCRSFEYKGF LCRHAIIVLQ MSGIFSIPSK YILQRWTNTA MSMNPINEKL  600
DEVQCKVRRF NDLCRRAIIL GEEGSLSQES YDIALSAINE ALKQCATVHS SVESDVRPDT  660
SAILVFGIED DNQCSNLAVD NAPDLKVINT KKSSKRAGSS KESAVNENNK NGKVPQLLDT  720
NARSQDDFNQ MQDLSNVRPI QLQISSAQFH NMVPTLLHNV TSTQFHSMPS AHLHENRLPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76320.1	0.0	FAR1 family protein