PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022146467.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family bHLH
Protein Properties Length: 331aa    MW: 36687.6 Da    PI: 4.6716
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022146467.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.25.4e-12159202654
                     HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                      ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  A++Y+k+L
  XP_022146467.1 159 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTAILADAIDYVKEL 202
                     589*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MELMMNEQYL LDEVAALRRE MNWELALPTE ISGWNTNNLV PDSASATSFC LPPLDDVHNN  60
NVNSYLLSSD DLIPFHGGAS ILSSLEGCDN GEYYPIANME EEELGILEDE IHNLEVQASC  120
CKAEPVAVVQ SPEAVPTFSA GACAHKSSKK LQGQPSKNLM AERRRRKRLN DRLSMLRSIV  180
PKISKMDRTA ILADAIDYVK ELLEKISNLQ REIEVGNPNP SKLGSSSSVG ILRDVKPNDY  240
LVRNSPKFNV ERRDMDTRIE VCCAPKPGLL LSTVHTLEAL GLDIQHCVIS SFNDFAIQAS  300
CSEEMDHRTM VSTDEVKQAL FETAGYGGRC L
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1162169ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.17e-83bHLH family protein