PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022146450.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family C2H2
Protein Properties Length: 480aa    MW: 52977.8 Da    PI: 6.1416
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022146450.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.70.00019125147123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++Cp+Cg+s+++ ++  +H  ++
  XP_022146450.1 125 FECPICGQSYRSEEEVSVHVDSC 147
                     89*****************8776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 480 aa     Download sequence    
MGDMKDKVKG FMKRVNNSLS SSSSASFKGQ GRVLGSSSSG STTSSLPTRP SQNPISKPKL  60
VHPPSDSTVN SKPPSSNSTG AGQIRSEVPS KSNPDRKPPA DEFDPFDSFI TSGKRSGNGY  120
SLDVFECPIC GQSYRSEEEV SVHVDSCVNN NTADRAEDLP TSNSESRSEL ETCVGTFISG  180
KPSQGSLEIV LKLMRNIVRE PENSKFRKIR LSNPKIKEAI GEAVGGVELL EFVGFKLQEE  240
DGEMWATMEV PTEEEIYRLS KVVDFIERPK LDERQNEGSS ASMASTQVDE LIEPKKVDRQ  300
TRVFFAVPEN VAANIELPDS FYNLSVEEVK REAIMRKQKI AESQFLVPKS YKEKQAKAAR  360
RKYTRTVIRI QFPDGVVLQG VFSPREPTSA VYEFVSSALK EPGLEFELIH PVGVKRRTIS  420
HFPVGQKAKT LDDEELVPSA LVKFRPIETD SVVFTGLRNE LLEIIEPLVS SSAVAHPAQV