PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022146435.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 526aa MW: 57169.5 Da PI: 5.3892

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022146435.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.5	2.7e-09	343	391	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + sk Ka +L + ++Y++sLq XP_022146435.1 343 NSHSLAERVRREKISERMRLLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 391 58***********************9....556***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 526 aa Download sequence
MNGKDEFEVE SRTSDPMSIS SGWQFSAANL TNDSVGYVST GNHSVVSNGD LGVSSCPSTS 60 MPNLFTPTLL NHHTNMQNSG FCSIFNEQNS IVTSNTTAVD GESLNSLRSG SDRMLGMDWN 120 QQNPWMKGVF SANVPGTFPA SLSQLPADSA FVERAARFSC FNNGVFVAPP TGPFGISDSI 180 SIHSRGEFGR QEDISRNGAA KDVSLPMKFE EAKEKNPPKT EKESERSQDR AKQGCVGESG 240 NESDEAGFSG GQDERCTLEG TITEPSTEGL CSKKRKRGGQ NMGPGQAKDA PQQIDEIAKN 300 RGLNQPKGDQ KPAGKQGKQD SQASDAPKEE YIHVRARRGQ ATNSHSLAER VRREKISERM 360 RLLQDLVPGC SKVTGKAVML DEIINYVQSL QRQVEFLSMK LATVNPRLDF NIEELLAKEI 420 IQSKAGPSLF GFPPDLPMPY LLQHPSHQGL VLPSLPNIGN SSDLLRRTIN SQLTSFVGGF 480 KEPVQLPNVW EDELHNAVPM NFDGTAPSNG QDVDGSTSQC NTRAEL

Sequence ? help Back to Top

Protein Sequence Length: 526 aa Download sequence

MNGKDEFEVE SRTSDPMSIS SGWQFSAANL TNDSVGYVST GNHSVVSNGD LGVSSCPSTS  60
MPNLFTPTLL NHHTNMQNSG FCSIFNEQNS IVTSNTTAVD GESLNSLRSG SDRMLGMDWN  120
QQNPWMKGVF SANVPGTFPA SLSQLPADSA FVERAARFSC FNNGVFVAPP TGPFGISDSI  180
SIHSRGEFGR QEDISRNGAA KDVSLPMKFE EAKEKNPPKT EKESERSQDR AKQGCVGESG  240
NESDEAGFSG GQDERCTLEG TITEPSTEGL CSKKRKRGGQ NMGPGQAKDA PQQIDEIAKN  300
RGLNQPKGDQ KPAGKQGKQD SQASDAPKEE YIHVRARRGQ ATNSHSLAER VRREKISERM  360
RLLQDLVPGC SKVTGKAVML DEIINYVQSL QRQVEFLSMK LATVNPRLDF NIEELLAKEI  420
IQSKAGPSLF GFPPDLPMPY LLQHPSHQGL VLPSLPNIGN SSDLLRRTIN SQLTSFVGGF  480
KEPVQLPNVW EDELHNAVPM NFDGTAPSNG QDVDGSTSQC NTRAEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.3	4e-95	bHLH family protein