PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022146256.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MYB_related
Protein Properties Length: 100aa    MW: 11186.4 Da    PI: 7.8619
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022146256.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.41.4e-071155244
                     SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                     g+WT+   + + +a + + ++   +W+ +a+ +g g+t+ ++k ++
   XP_022146256.1 11 GSWTPNQNKAFERALAVFDKDtpdRWHNVANAVG-GKTADEVKRHF 55
                     89********************************.**********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 100 aa     Download sequence    
MAAMSSRDSS GSWTPNQNKA FERALAVFDK DTPDRWHNVA NAVGGKTADE VKRHFDLLVE  60
DVKHIESGRI PFPNYTATTT GSSNGNVNDE EKRMRNLKLH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.12e-40MYB_related family protein