PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022146256.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | MYB_related | ||||||||
Protein Properties | Length: 100aa MW: 11186.4 Da PI: 7.8619 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 23.4 | 1.4e-07 | 11 | 55 | 2 | 44 |
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 g+WT+ + + +a + + ++ +W+ +a+ +g g+t+ ++k ++ XP_022146256.1 11 GSWTPNQNKAFERALAVFDKDtpdRWHNVANAVG-GKTADEVKRHF 55 89********************************.**********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 100 aa Download sequence |
MAAMSSRDSS GSWTPNQNKA FERALAVFDK DTPDRWHNVA NAVGGKTADE VKRHFDLLVE 60 DVKHIESGRI PFPNYTATTT GSSNGNVNDE EKRMRNLKLH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G39250.1 | 2e-40 | MYB_related family protein |