PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022145773.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family NAC
Protein Properties Length: 331aa    MW: 38805.5 Da    PI: 4.6193
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022145773.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM53.29.9e-1731301128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                     lp +++F+P+++e++++yL +k+ g+  +    ++ +d+y+ eP+++ +    ++ +++y F+k ++k ++  rk    ++g+W+a    +++++
  XP_022145773.1   3 LPSCYKFNPKNQEILDYYLFHKIVGEFKTP-LQLPVIDLYSQEPSEIWEnLGCTDGEDLYVFTKLKRKRTRVIRKVSXSNAGTWSAETAPTKIFT 96 
                     68899******************9987555.469*************741333466799***********999999999***************9 PP

             NAM  95 k..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +   + l g+ k + + +g+  +    +W+m ey+l
  XP_022145773.1  97 TttPEILLGTMKRFHYENGQ--DCGPFSWIMYEYSL 130
                     83334446777777666444..44589*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MKLPSCYKFN PKNQEILDYY LFHKIVGEFK TPLQLPVIDL YSQEPSEIWE NLGCTDGEDL  60
YVFTKLKRKR TRVIRKVSXS NAGTWSAETA PTKIFTTTTP EILLGTMKRF HYENGQDCGP  120
FSWIMYEYSL DPSILPSTTT IDIKDSYVLC KIRKKMKNVE DSXEEVPTKR QIVYDGPDPK  180
RRKLVQVMHN EFQFSNDKGL GGVVWPTTQM GSFIPDFENI QFPREGELYK NVDNLNTYTK  240
IQMKSRDEDE YEELIRILDA SNNVEPTNIE KDNDFDKECI ITRSHDQDED EBAEFAEEIR  300
RELDQCNDVE HANIGEDYSF QNEWWGKSVH R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17260.11e-10NAC family protein