PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022145765.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

C2H2

Protein Properties

Length: 503aa MW: 54156.3 Da PI: 9.7495

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022145765.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.2	3e-05	66	88	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H XP_022145765.1 66 FICEICNKGFQRDQNLQLHRRGH 88 89*******************88 PP
2	zf-C2H2	12.1	0.00059	143	165	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +t+ XP_022145765.1 143 WKCDKCSKKYAVQSDWKAHSKTC 165 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 503 aa Download sequence
MSSNPFSLLS SAPTAFAPQQ DANPDPNSKP KPSAAAKKKR NLPGNPDPDA EVIALSPKSL 60 MATNRFICEI CNKGFQRDQN LQLHRRGHNL PWKLRQRTNK EPIKKKVYIC PEKTCVHHDP 120 SRALGDLTGI KKHFSRKHGE KKWKCDKCSK KYAVQSDWKA HSKTCGTREY KCDCGTLFSR 180 KDSFITHRAF CDALAEESAR ITTVSATNIL NNLRNDSILL HQQDPHQSLV DPHSNNNNNN 240 NHNHNNLQSL GDVSGLSQFS HSDFLRDLED QQHKNRSPLS LWLNQASAET AINNNNISSF 300 FGSSSSSSNL FGSINESGIS GLSVLPVIDK EDVENKASLS KATAAALLSG QSSQSVVSSS 360 SPMSATALLQ KAALMGSTRS NNNNSSLFGA GGFGVMSSSS SASSSSSSSS SNAVSLNSLN 420 KTRSLTMADS MQMVGSSDLS SNCLSQVLLS NGNNGMRSNG QTRDFLGVGG SGEAPRPPFL 480 PPELAKFAAI NSTMGLSQFA ANH

Sequence ? help Back to Top

Protein Sequence Length: 503 aa Download sequence

MSSNPFSLLS SAPTAFAPQQ DANPDPNSKP KPSAAAKKKR NLPGNPDPDA EVIALSPKSL  60
MATNRFICEI CNKGFQRDQN LQLHRRGHNL PWKLRQRTNK EPIKKKVYIC PEKTCVHHDP  120
SRALGDLTGI KKHFSRKHGE KKWKCDKCSK KYAVQSDWKA HSKTCGTREY KCDCGTLFSR  180
KDSFITHRAF CDALAEESAR ITTVSATNIL NNLRNDSILL HQQDPHQSLV DPHSNNNNNN  240
NHNHNNLQSL GDVSGLSQFS HSDFLRDLED QQHKNRSPLS LWLNQASAET AINNNNISSF  300
FGSSSSSSNL FGSINESGIS GLSVLPVIDK EDVENKASLS KATAAALLSG QSSQSVVSSS  360
SPMSATALLQ KAALMGSTRS NNNNSSLFGA GGFGVMSSSS SASSSSSSSS SNAVSLNSLN  420
KTRSLTMADS MQMVGSSDLS SNCLSQVLLS NGNNGMRSNG QTRDFLGVGG SGEAPRPPFL  480
PPELAKFAAI NSTMGLSQFA ANH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G45260.1	1e-103	C2H2 family protein